Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC103798.2-201ENST00000624292 632 ntBASIC6.21□□□□□ -1.42
NR1H2P55055 AC127071.1-201ENST00000624997 712 ntBASIC6.21□□□□□ -1.42
NR1H2P55055 AL049541.2-201ENST00000626377 555 ntBASIC6.21□□□□□ -1.42
NR1H2P55055 AC011471.4-201ENST00000638271 216 ntBASIC6.21□□□□□ -1.42
NR1H2P55055 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.21□□□□□ -1.42
NR1H2P55055 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NR1H2P55055 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NR1H2P55055 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
NR1H2P55055 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NR1H2P55055 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
NR1H2P55055 AC009220.2-201ENST00000489759 1751 ntBASIC6.21□□□□□ -1.42
NR1H2P55055 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.21□□□□□ -1.42
NR1H2P55055 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NR1H2P55055 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
NR1H2P55055 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NR1H2P55055 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NR1H2P55055 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.2□□□□□ -1.42
NR1H2P55055 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NR1H2P55055 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NR1H2P55055 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NR1H2P55055 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NR1H2P55055 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NR1H2P55055 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NR1H2P55055 RNU4-39P-201ENST00000362455 127 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 RN7SKP47-201ENST00000365347 328 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.2□□□□□ -1.42
NR1H2P55055 RN7SKP161-201ENST00000411110 305 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.2□□□□□ -1.42
NR1H2P55055 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.2□□□□□ -1.42
NR1H2P55055 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.2□□□□□ -1.42
NR1H2P55055 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.2□□□□□ -1.42
NR1H2P55055 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NR1H2P55055 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
NR1H2P55055 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NR1H2P55055 AC046176.1-201ENST00000435260 1170 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.2□□□□□ -1.42
NR1H2P55055 KF459542.1-201ENST00000450908 553 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
NR1H2P55055 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.2□□□□□ -1.42
NR1H2P55055 SNORA81.1-201ENST00000458922 177 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 RN7SL492P-201ENST00000460700 295 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 AL049829.1-201ENST00000465411 156 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 SNRPCP3-201ENST00000474888 476 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 RN7SL382P-201ENST00000482631 282 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 RN7SL655P-201ENST00000486087 298 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.2□□□□□ -1.42
NR1H2P55055 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.2□□□□□ -1.42
NR1H2P55055 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.2□□□□□ -1.42
NR1H2P55055 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NR1H2P55055 HMGB1P47-201ENST00000511281 589 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.2□□□□□ -1.42
NR1H2P55055 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.2□□□□□ -1.42
NR1H2P55055 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.2□□□□□ -1.42
NR1H2P55055 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NR1H2P55055 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.2□□□□□ -1.42
NR1H2P55055 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NR1H2P55055 AC010287.1-201ENST00000566916 357 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.2□□□□□ -1.42
NR1H2P55055 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.2□□□□□ -1.42
NR1H2P55055 AC005726.4-201ENST00000582858 458 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.2□□□□□ -1.42
NR1H2P55055 AC074276.2-201ENST00000619891 348 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 AC007603.3-201ENST00000636915 979 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NR1H2P55055 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.2□□□□□ -1.42
NR1H2P55055 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.2□□□□□ -1.42
NR1H2P55055 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NR1H2P55055 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NR1H2P55055 NCOA4P2-201ENST00000340589 1813 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NR1H2P55055 AC096992.2-201ENST00000609553 1684 ntBASIC6.2□□□□□ -1.42
NR1H2P55055 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NR1H2P55055 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NR1H2P55055 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.19□□□□□ -1.42
NR1H2P55055 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NR1H2P55055 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.19□□□□□ -1.42
NR1H2P55055 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 AL355834.1-201ENST00000556602 3965 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.19□□□□□ -1.42
NR1H2P55055 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
NR1H2P55055 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
NR1H2P55055 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.19□□□□□ -1.42
NR1H2P55055 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NR1H2P55055 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NR1H2P55055 RNU2-22P-201ENST00000411266 212 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NR1H2P55055 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC6.19□□□□□ -1.42
NR1H2P55055 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.19□□□□□ -1.42
NR1H2P55055 AC114402.2-201ENST00000432760 643 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms