Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
LIMK1P53667 AL355377.1-201ENST00000621125 1653 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK1P53667 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK1P53667 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.41□□□□□ -1.38
LIMK1P53667 CASC19-255ENST00000641733 1385 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
LIMK1P53667 DDX43P1-201ENST00000510713 1763 ntBASIC6.41□□□□□ -1.38
LIMK1P53667 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK1P53667 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK1P53667 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK1P53667 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIMK1P53667 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.41□□□□□ -1.38
LIMK1P53667 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.4□□□□□ -1.38
LIMK1P53667 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.4□□□□□ -1.38
LIMK1P53667 CASC19-238ENST00000641523 1558 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK1P53667 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.4□□□□□ -1.38
LIMK1P53667 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK1P53667 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
LIMK1P53667 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK1P53667 AC012213.2-201ENST00000562917 4597 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.4□□□□□ -1.38
LIMK1P53667 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.4□□□□□ -1.38
LIMK1P53667 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK1P53667 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK1P53667 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK1P53667 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
LIMK1P53667 FUNDC2P3-201ENST00000334716 533 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 RNA5SP242-201ENST00000364171 118 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 U3.25-201ENST00000391209 220 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
LIMK1P53667 RN7SKP271-201ENST00000410528 320 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 RN7SKP296-201ENST00000411185 341 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.4□□□□□ -1.38
LIMK1P53667 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
LIMK1P53667 DUTP4-201ENST00000424782 475 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.4□□□□□ -1.38
LIMK1P53667 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
LIMK1P53667 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.4□□□□□ -1.38
LIMK1P53667 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
LIMK1P53667 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.4□□□□□ -1.38
LIMK1P53667 AC023141.9-201ENST00000458734 412 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 AC096743.1-201ENST00000485172 319 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK1P53667 RN7SL284P-201ENST00000498823 275 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
LIMK1P53667 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK1P53667 EEF1B2P2-201ENST00000519625 676 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.4□□□□□ -1.38
LIMK1P53667 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.4□□□□□ -1.38
LIMK1P53667 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.4□□□□□ -1.38
LIMK1P53667 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.4□□□□□ -1.38
LIMK1P53667 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.4□□□□□ -1.38
LIMK1P53667 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.4□□□□□ -1.38
LIMK1P53667 AC131009.3-201ENST00000621809 287 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
LIMK1P53667 AC073488.3-201ENST00000631611 778 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 AL049767.1-202ENST00000637826 242 ntBASIC6.4□□□□□ -1.38
LIMK1P53667 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LIMK1P53667 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
LIMK1P53667 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LIMK1P53667 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
LIMK1P53667 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.4□□□□□ -1.39
LIMK1P53667 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.4□□□□□ -1.39
LIMK1P53667 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.39
LIMK1P53667 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.4□□□□□ -1.39
LIMK1P53667 AC027575.3-201ENST00000583058 2747 ntBASIC6.4□□□□□ -1.39
LIMK1P53667 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LIMK1P53667 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.4□□□□□ -1.39
LIMK1P53667 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LIMK1P53667 RPL31P11-201ENST00000426558 1558 ntBASIC6.4□□□□□ -1.39
LIMK1P53667 AC091305.2-201ENST00000624049 1576 ntBASIC6.4□□□□□ -1.39
LIMK1P53667 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
LIMK1P53667 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.39□□□□□ -1.39
LIMK1P53667 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
LIMK1P53667 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
LIMK1P53667 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.39□□□□□ -1.39
LIMK1P53667 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK1P53667 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.39□□□□□ -1.39
LIMK1P53667 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.39□□□□□ -1.39
LIMK1P53667 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK1P53667 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
LIMK1P53667 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK1P53667 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK1P53667 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK1P53667 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK1P53667 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK1P53667 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK1P53667 AL353626.3-201ENST00000413399 657 ntBASIC6.39□□□□□ -1.39
LIMK1P53667 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK1P53667 AL121776.1-201ENST00000429337 372 ntBASIC6.39□□□□□ -1.39
LIMK1P53667 AC094019.1-201ENST00000434678 472 ntBASIC6.39□□□□□ -1.39
LIMK1P53667 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.39□□□□□ -1.39
LIMK1P53667 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK1P53667 AC104849.1-201ENST00000462623 405 ntBASIC6.39□□□□□ -1.39
LIMK1P53667 AC008410.1-201ENST00000483777 339 ntBASIC6.39□□□□□ -1.39
LIMK1P53667 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.39□□□□□ -1.39
LIMK1P53667 RPL19P11-201ENST00000495944 589 ntBASIC6.39□□□□□ -1.39
LIMK1P53667 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms