Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC068726.1-201ENST00000610993 341 ntBASIC5.44□□□□□ -1.54
CX3CR1P49238 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CR1P49238 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.44□□□□□ -1.54
CX3CR1P49238 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CR1P49238 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CR1P49238 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CR1P49238 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CR1P49238 BX284613.1-201ENST00000452221 1641 ntBASIC5.44□□□□□ -1.54
CX3CR1P49238 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CR1P49238 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CR1P49238 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.44□□□□□ -1.54
CX3CR1P49238 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CX3CR1P49238 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.44□□□□□ -1.54
CX3CR1P49238 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CX3CR1P49238 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CX3CR1P49238 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CX3CR1P49238 AC004656.1-201ENST00000568479 4951 ntBASIC5.44□□□□□ -1.54
CX3CR1P49238 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.44□□□□□ -1.54
CX3CR1P49238 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CR1P49238 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CR1P49238 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CR1P49238 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CR1P49238 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CR1P49238 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CR1P49238 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CR1P49238 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CR1P49238 SNORA43.1-201ENST00000364863 140 ntBASIC5.43□□□□□ -1.54
CX3CR1P49238 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
CX3CR1P49238 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CR1P49238 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 DHFRP2-201ENST00000414224 547 ntBASIC5.43□□□□□ -1.54
CX3CR1P49238 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CR1P49238 AL360013.1-201ENST00000419031 858 ntBASIC5.43□□□□□ -1.54
CX3CR1P49238 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.43□□□□□ -1.54
CX3CR1P49238 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CR1P49238 AC016027.5-201ENST00000427227 210 ntBASIC5.43□□□□□ -1.54
CX3CR1P49238 AC112492.2-201ENST00000432774 1030 ntBASIC5.43□□□□□ -1.54
CX3CR1P49238 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CX3CR1P49238 AL445991.1-201ENST00000450381 475 ntBASIC5.43□□□□□ -1.54
CX3CR1P49238 RN7SL326P-201ENST00000477493 296 ntBASIC5.43□□□□□ -1.54
CX3CR1P49238 RPS4XP17-201ENST00000479057 754 ntBASIC5.43□□□□□ -1.54
CX3CR1P49238 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CR1P49238 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CR1P49238 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CR1P49238 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CR1P49238 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CR1P49238 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 CYCSP25-201ENST00000525280 316 ntBASIC5.43□□□□□ -1.54
CX3CR1P49238 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CR1P49238 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CR1P49238 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CR1P49238 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CR1P49238 AC026898.1-201ENST00000586404 571 ntBASIC5.43□□□□□ -1.54
CX3CR1P49238 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CR1P49238 AC137056.2-201ENST00000624055 1958 ntBASIC5.43□□□□□ -1.54
CX3CR1P49238 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.43□□□□□ -1.54
CX3CR1P49238 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.43□□□□□ -1.54
CX3CR1P49238 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CR1P49238 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CX3CR1P49238 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CR1P49238 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CR1P49238 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CX3CR1P49238 AC079248.1-201ENST00000427568 1546 ntBASIC5.43□□□□□ -1.54
CX3CR1P49238 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CX3CR1P49238 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
CX3CR1P49238 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.42□□□□□ -1.54
CX3CR1P49238 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
CX3CR1P49238 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CX3CR1P49238 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 YWHAZP4-201ENST00000392459 708 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.42□□□□□ -1.54
CX3CR1P49238 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.42□□□□□ -1.54
CX3CR1P49238 RN7SKP121-201ENST00000410842 305 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.42□□□□□ -1.54
CX3CR1P49238 OSTCP4-201ENST00000424397 449 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.42□□□□□ -1.54
CX3CR1P49238 RPEP4-201ENST00000437636 602 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 SOCS5P1-201ENST00000440415 949 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.42□□□□□ -1.54
CX3CR1P49238 RBMY2BP-202ENST00000451071 1156 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 RPS26P24-201ENST00000497656 331 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 OR4D12P-201ENST00000509361 911 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms