Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 AL683826.1-201ENST00000624104 627 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 AL162377.2-201ENST00000624532 337 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.08□□□□□ -1.44
SHMT2P34897 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SHMT2P34897 AC092070.2-203ENST00000598377 3644 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.08□□□□□ -1.44
SHMT2P34897 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.08□□□□□ -1.44
SHMT2P34897 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHMT2P34897 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHMT2P34897 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SHMT2P34897 AC023632.6-201ENST00000624338 2177 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.07□□□□□ -1.44
SHMT2P34897 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.07□□□□□ -1.44
SHMT2P34897 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.07□□□□□ -1.44
SHMT2P34897 NCOA4P2-201ENST00000340589 1813 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHMT2P34897 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHMT2P34897 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHMT2P34897 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SHMT2P34897 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHMT2P34897 RNU1-59P-201ENST00000364829 162 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
SHMT2P34897 RN7SKP161-201ENST00000411110 305 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 CYP4F30P-202ENST00000420048 405 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.07□□□□□ -1.44
SHMT2P34897 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.07□□□□□ -1.44
SHMT2P34897 PPIAP10-201ENST00000438675 458 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 AC092967.1-201ENST00000449016 481 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 HMGB1P7-201ENST00000450921 612 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 HIGD1AP16-201ENST00000450986 258 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 RPL12P30-201ENST00000488389 499 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 AC021006.1-201ENST00000489849 553 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.07□□□□□ -1.44
SHMT2P34897 SNX18P24-201ENST00000505249 671 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 AC091874.2-201ENST00000505889 720 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 HMGN1P17-201ENST00000513734 295 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 MAST4-IT1-201ENST00000514241 658 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.07□□□□□ -1.44
SHMT2P34897 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.07□□□□□ -1.44
SHMT2P34897 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.07□□□□□ -1.44
SHMT2P34897 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.07□□□□□ -1.44
SHMT2P34897 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.07□□□□□ -1.44
SHMT2P34897 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.07□□□□□ -1.44
SHMT2P34897 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHMT2P34897 HNRNPCP1-201ENST00000556181 766 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 AC107958.1-201ENST00000556576 290 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 AC004232.2-201ENST00000574245 821 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.07□□□□□ -1.44
SHMT2P34897 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.07□□□□□ -1.44
SHMT2P34897 AC024589.2-201ENST00000605642 1294 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 U1.25-201ENST00000614085 162 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 U1.34-201ENST00000618578 162 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 U1.31-201ENST00000620022 160 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.07□□□□□ -1.44
SHMT2P34897 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
SHMT2P34897 BIN2P1-201ENST00000504996 1530 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHMT2P34897 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHMT2P34897 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SHMT2P34897 GUCY1B2-204ENST00000531898 1979 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHMT2P34897 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SHMT2P34897 BX284613.1-201ENST00000452221 1641 ntBASIC6.07□□□□□ -1.44
SHMT2P34897 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.07□□□□□ -1.44
SHMT2P34897 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SHMT2P34897 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.06□□□□□ -1.44
SHMT2P34897 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHMT2P34897 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHMT2P34897 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SHMT2P34897 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHMT2P34897 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.06□□□□□ -1.44
SHMT2P34897 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHMT2P34897 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.06□□□□□ -1.44
SHMT2P34897 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SHMT2P34897 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHMT2P34897 MIR433-201ENST00000384837 93 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 RNU11-6P-201ENST00000391127 133 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 AL035422.1-201ENST00000414193 397 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 RPS26P38-201ENST00000414476 348 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 RPS7P14-201ENST00000426405 583 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 OR3D1P-201ENST00000438288 955 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 OR13K1P-201ENST00000444577 975 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 CTSLP6-201ENST00000458273 1002 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.06□□□□□ -1.44
SHMT2P34897 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.06□□□□□ -1.44
SHMT2P34897 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.06□□□□□ -1.44
SHMT2P34897 AC036111.2-201ENST00000533247 901 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms