Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN6P29350 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN6P29350 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.94□□□□□ -1.46
PTPN6P29350 AC125238.2-201ENST00000430003 1440 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN6P29350 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN6P29350 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN6P29350 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PTPN6P29350 AL445238.1-204ENST00000400311 463 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 AL121835.1-201ENST00000404250 354 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 RN7SKP151-201ENST00000410230 316 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.94□□□□□ -1.46
PTPN6P29350 NME1P1-201ENST00000420914 382 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN6P29350 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.94□□□□□ -1.46
PTPN6P29350 RPL34P27-201ENST00000428810 349 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 ARMC4P1-201ENST00000438905 707 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.94□□□□□ -1.46
PTPN6P29350 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.94□□□□□ -1.46
PTPN6P29350 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.94□□□□□ -1.46
PTPN6P29350 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.94□□□□□ -1.46
PTPN6P29350 AL355032.1-201ENST00000472981 438 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 AC005017.1-201ENST00000482002 490 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 RPL29P23-201ENST00000486188 442 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.94□□□□□ -1.46
PTPN6P29350 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.94□□□□□ -1.46
PTPN6P29350 OR6M2P-201ENST00000529831 871 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 RPA2P3-201ENST00000533268 770 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN6P29350 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.94□□□□□ -1.46
PTPN6P29350 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.94□□□□□ -1.46
PTPN6P29350 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN6P29350 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN6P29350 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN6P29350 NPIPB1P-202ENST00000588786 828 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.94□□□□□ -1.46
PTPN6P29350 AC011500.1-201ENST00000601963 469 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 AC027334.1-201ENST00000603257 310 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 AL161912.3-201ENST00000605404 628 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 AC009779.8-202ENST00000607990 932 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PTPN6P29350 AC003992.1-201ENST00000635364 557 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN6P29350 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN6P29350 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.94□□□□□ -1.46
PTPN6P29350 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN6P29350 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN6P29350 AL136984.1-201ENST00000607611 1893 ntBASIC5.94□□□□□ -1.46
PTPN6P29350 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN6P29350 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN6P29350 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PTPN6P29350 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN6P29350 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PTPN6P29350 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN6P29350 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN6P29350 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PTPN6P29350 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN6P29350 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN6P29350 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN6P29350 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
PTPN6P29350 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN6P29350 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PTPN6P29350 AC007159.1-201ENST00000566529 4706 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN6P29350 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN6P29350 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PTPN6P29350 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PTPN6P29350 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
PTPN6P29350 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN6P29350 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PTPN6P29350 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN6P29350 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.93□□□□□ -1.46
PTPN6P29350 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PTPN6P29350 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN6P29350 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.93□□□□□ -1.46
PTPN6P29350 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN6P29350 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN6P29350 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.93□□□□□ -1.46
PTPN6P29350 USP9YP2-201ENST00000504503 1000 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 GUSBP9-201ENST00000510138 584 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 USP9YP1-201ENST00000513521 1002 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 RN7SKP67-201ENST00000515905 235 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 SUMO2P19-201ENST00000518920 295 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN6P29350 AP003033.2-201ENST00000528901 805 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN6P29350 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.93□□□□□ -1.46
PTPN6P29350 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN6P29350 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN6P29350 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.93□□□□□ -1.46
PTPN6P29350 AC023968.1-201ENST00000560719 475 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 MT1CP-201ENST00000567054 174 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.93□□□□□ -1.46
PTPN6P29350 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN6P29350 AC005332.4-201ENST00000592752 579 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 AC063977.7-201ENST00000594454 337 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 AC012368.3-201ENST00000604190 219 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms