Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC8.6□□□□□ -1.03
RXRBP28702 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC8.6□□□□□ -1.03
RXRBP28702 RPS26P41-201ENST00000450370 284 ntBASIC8.6□□□□□ -1.03
RXRBP28702 AL672167.3-201ENST00000465951 960 ntBASIC8.6□□□□□ -1.03
RXRBP28702 SEPT7P6-201ENST00000469999 1143 ntBASIC8.6□□□□□ -1.03
RXRBP28702 SIAH1P1-201ENST00000479411 923 ntBASIC8.6□□□□□ -1.03
RXRBP28702 RN7SL193P-201ENST00000491708 276 ntBASIC8.6□□□□□ -1.03
RXRBP28702 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 AC146944.3-201ENST00000509969 371 ntBASIC8.6□□□□□ -1.03
RXRBP28702 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC8.6□□□□□ -1.03
RXRBP28702 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.6□□□□□ -1.03
RXRBP28702 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC8.6□□□□□ -1.03
RXRBP28702 ZKSCAN7P1-201ENST00000543668 673 ntBASIC8.6□□□□□ -1.03
RXRBP28702 AC015911.5-201ENST00000587076 451 ntBASIC8.6□□□□□ -1.03
RXRBP28702 AL671309.1-201ENST00000603750 544 ntBASIC8.6□□□□□ -1.03
RXRBP28702 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.6□□□□□ -1.03
RXRBP28702 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC8.6□□□□□ -1.03
RXRBP28702 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
RXRBP28702 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC8.6□□□□□ -1.03
RXRBP28702 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC8.6□□□□□ -1.03
RXRBP28702 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
RXRBP28702 AC079753.1-201ENST00000623243 3868 ntBASIC8.6□□□□□ -1.03
RXRBP28702 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.6□□□□□ -1.03
RXRBP28702 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.6□□□□□ -1.03
RXRBP28702 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.6□□□□□ -1.03
RXRBP28702 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
RXRBP28702 AL121949.2-201ENST00000403446 1548 ntBASIC8.59□□□□□ -1.03
RXRBP28702 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
RXRBP28702 PHF2P2-202ENST00000444553 2865 ntBASIC8.59□□□□□ -1.03
RXRBP28702 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.59□□□□□ -1.03
RXRBP28702 OFD1P17-201ENST00000437639 3018 ntBASIC8.59□□□□□ -1.03
RXRBP28702 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.59□□□□□ -1.03
RXRBP28702 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC8.59□□□□□ -1.03
RXRBP28702 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.59□□□□□ -1.03
RXRBP28702 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RXRBP28702 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
RXRBP28702 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RXRBP28702 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RXRBP28702 PTGES3P2-201ENST00000407942 482 ntBASIC8.59□□□□□ -1.03
RXRBP28702 AC107081.1-201ENST00000414975 361 ntBASIC8.59□□□□□ -1.03
RXRBP28702 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.59□□□□□ -1.03
RXRBP28702 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC8.59□□□□□ -1.03
RXRBP28702 ELOCP11-201ENST00000436690 332 ntBASIC8.59□□□□□ -1.03
RXRBP28702 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC8.59□□□□□ -1.03
RXRBP28702 ELOCP16-201ENST00000444494 332 ntBASIC8.59□□□□□ -1.03
RXRBP28702 VN1R96P-201ENST00000446052 858 ntBASIC8.59□□□□□ -1.03
RXRBP28702 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RXRBP28702 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RXRBP28702 MTND1P29-201ENST00000448112 647 ntBASIC8.59□□□□□ -1.03
RXRBP28702 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC8.59□□□□□ -1.03
RXRBP28702 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC8.59□□□□□ -1.03
RXRBP28702 DUTP7-201ENST00000507982 486 ntBASIC8.59□□□□□ -1.03
RXRBP28702 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC8.59□□□□□ -1.03
RXRBP28702 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC8.59□□□□□ -1.03
RXRBP28702 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC8.59□□□□□ -1.03
RXRBP28702 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC8.59□□□□□ -1.03
RXRBP28702 AC125611.1-201ENST00000549563 229 ntBASIC8.59□□□□□ -1.03
RXRBP28702 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.59□□□□□ -1.03
RXRBP28702 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC8.59□□□□□ -1.03
RXRBP28702 AP000919.1-201ENST00000582850 985 ntBASIC8.59□□□□□ -1.03
RXRBP28702 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
RXRBP28702 AC073046.2-201ENST00000604756 527 ntBASIC8.59□□□□□ -1.03
RXRBP28702 Mico1.1-201ENST00000611698 204 ntBASIC8.59□□□□□ -1.03
RXRBP28702 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC8.59□□□□□ -1.03
RXRBP28702 AP002791.1-201ENST00000623291 381 ntBASIC8.59□□□□□ -1.03
RXRBP28702 AL691477.1-201ENST00000624398 162 ntBASIC8.59□□□□□ -1.03
RXRBP28702 AC092184.1-201ENST00000625042 715 ntBASIC8.59□□□□□ -1.03
RXRBP28702 AC006927.2-201ENST00000639256 389 ntBASIC8.59□□□□□ -1.03
RXRBP28702 AC116667.2-201ENST00000641075 823 ntBASIC8.59□□□□□ -1.03
RXRBP28702 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RXRBP28702 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC8.59□□□□□ -1.03
RXRBP28702 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RXRBP28702 FO393409.1-201ENST00000399325 1372 ntBASIC8.59□□□□□ -1.03
RXRBP28702 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC8.59□□□□□ -1.03
RXRBP28702 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
RXRBP28702 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
RXRBP28702 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
RXRBP28702 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.58□□□□□ -1.04
RXRBP28702 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC8.58□□□□□ -1.04
RXRBP28702 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RXRBP28702 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
RXRBP28702 GLYATL1P1-201ENST00000528297 1607 ntBASIC8.58□□□□□ -1.04
RXRBP28702 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC8.58□□□□□ -1.04
RXRBP28702 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.58□□□□□ -1.04
RXRBP28702 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
RXRBP28702 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
RXRBP28702 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
RXRBP28702 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
RXRBP28702 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
RXRBP28702 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC8.58□□□□□ -1.04
RXRBP28702 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RXRBP28702 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
RXRBP28702 AC091132.4-201ENST00000587960 2262 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 332.4 ms