Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.54□□□□□ -1.36
ATF4P18848 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
ATF4P18848 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.54□□□□□ -1.36
ATF4P18848 AC005034.3-201ENST00000604845 1747 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AL022163.1-201ENST00000430261 1569 ntBASIC6.54□□□□□ -1.36
ATF4P18848 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 RSRC1-202ENST00000312179 1443 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.54□□□□□ -1.36
ATF4P18848 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 MIR146B-201ENST00000365699 73 ntBASIC6.54□□□□□ -1.36
ATF4P18848 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
ATF4P18848 AL133264.1-201ENST00000407157 562 ntBASIC6.54□□□□□ -1.36
ATF4P18848 RNU6-272P-201ENST00000411028 104 ntBASIC6.54□□□□□ -1.36
ATF4P18848 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
ATF4P18848 AL031779.1-201ENST00000415663 330 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AC007359.1-201ENST00000417910 745 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF4P18848 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 OR51A8P-201ENST00000421277 940 ntBASIC6.54□□□□□ -1.36
ATF4P18848 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 AL589823.1-201ENST00000429577 183 ntBASIC6.54□□□□□ -1.36
ATF4P18848 LINC00892-202ENST00000429841 529 ntTSL 2 BASIC6.54□□□□□ -1.36
ATF4P18848 AL512882.1-201ENST00000436086 832 ntBASIC6.54□□□□□ -1.36
ATF4P18848 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 Z98747.1-201ENST00000438791 356 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF4P18848 AC008175.1-202ENST00000439653 745 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF4P18848 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 MT1G-202ENST00000444837 406 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 ZNF619P1-201ENST00000446539 752 ntBASIC6.54□□□□□ -1.36
ATF4P18848 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC6.54□□□□□ -1.36
ATF4P18848 RPL7P59-201ENST00000447700 943 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AC092634.4-203ENST00000451395 448 ntBASIC6.54□□□□□ -1.36
ATF4P18848 TMEM97P1-201ENST00000452969 451 ntBASIC6.54□□□□□ -1.36
ATF4P18848 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF4P18848 AL096803.1-201ENST00000456921 1021 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AL031727.1-201ENST00000457263 455 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AC010307.1-201ENST00000467206 836 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AC021074.2-201ENST00000468434 172 ntBASIC6.54□□□□□ -1.36
ATF4P18848 RPL12P5-201ENST00000475149 392 ntBASIC6.54□□□□□ -1.36
ATF4P18848 RPS27P23-201ENST00000487608 251 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AC104685.1-201ENST00000502445 371 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF4P18848 MTATP6P22-201ENST00000507369 598 ntBASIC6.54□□□□□ -1.36
ATF4P18848 MTND4P2-201ENST00000507767 1203 ntBASIC6.54□□□□□ -1.36
ATF4P18848 ATP1B1P1-201ENST00000509767 915 ntBASIC6.54□□□□□ -1.36
ATF4P18848 RPL37-205ENST00000509877 637 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 AC138866.1-201ENST00000514522 497 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.54□□□□□ -1.36
ATF4P18848 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF4P18848 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 IGLVIV-64-201ENST00000518581 301 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF4P18848 AC144568.2-201ENST00000522481 944 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 IGKV3-25-201ENST00000523155 253 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.54□□□□□ -1.36
ATF4P18848 OR4A9P-201ENST00000526326 944 ntBASIC6.54□□□□□ -1.36
ATF4P18848 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.54□□□□□ -1.36
ATF4P18848 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF4P18848 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF4P18848 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF4P18848 BLZF2P-201ENST00000553776 1130 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF4P18848 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF4P18848 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF4P18848 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC6.54□□□□□ -1.36
ATF4P18848 AC004253.1-201ENST00000583236 488 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 AL158151.4-201ENST00000600965 507 ntBASIC6.54□□□□□ -1.36
ATF4P18848 CYCSP1-201ENST00000604815 315 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AL022345.3-201ENST00000611406 228 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AC005962.2-201ENST00000611427 652 ntBASIC6.54□□□□□ -1.36
ATF4P18848 RBM22P4-201ENST00000613117 1240 ntBASIC6.54□□□□□ -1.36
ATF4P18848 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 Metazoa_SRP.20-201ENST00000619896 275 ntBASIC6.54□□□□□ -1.36
ATF4P18848 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
ATF4P18848 MIR7113-201ENST00000621222 59 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 AC073348.1-201ENST00000623002 331 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AC091953.4-201ENST00000625179 341 ntBASIC6.54□□□□□ -1.36
ATF4P18848 AC073488.2-201ENST00000631903 751 ntBASIC6.54□□□□□ -1.36
ATF4P18848 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.54□□□□□ -1.36
ATF4P18848 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
ATF4P18848 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms