Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNA5SP334-201ENST00000364825 118 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
COL6A2P12110 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 FAUP2-201ENST00000394301 401 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 HNRNPDP2-201ENST00000406475 478 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.82□□□□□ -1.32
COL6A2P12110 AL157698.1-201ENST00000415190 1011 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.82□□□□□ -1.32
COL6A2P12110 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.82□□□□□ -1.32
COL6A2P12110 AF274573.1-201ENST00000430535 494 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 RPS21P1-201ENST00000434479 247 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 CDY12P-201ENST00000440679 1015 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 CDY13P-201ENST00000445813 1015 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
COL6A2P12110 RPL7P14-201ENST00000449851 741 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 RPLP0P1-201ENST00000457002 361 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 RPSAP37-201ENST00000470913 821 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.82□□□□□ -1.32
COL6A2P12110 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.82□□□□□ -1.32
COL6A2P12110 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.82□□□□□ -1.32
COL6A2P12110 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC6.82□□□□□ -1.32
COL6A2P12110 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.82□□□□□ -1.32
COL6A2P12110 AP000916.1-201ENST00000533869 835 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.82□□□□□ -1.32
COL6A2P12110 HIGD1AP9-201ENST00000550710 279 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AL049869.4-201ENST00000555669 178 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 AC090971.3-201ENST00000557871 1041 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.82□□□□□ -1.32
COL6A2P12110 BMS1P8-201ENST00000565049 1178 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.82□□□□□ -1.32
COL6A2P12110 PIGPP4-201ENST00000584447 307 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.82□□□□□ -1.32
COL6A2P12110 CCDC58P3-201ENST00000590792 430 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AC107993.1-201ENST00000591343 684 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AL022161.1-201ENST00000604390 213 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AC012213.4-201ENST00000606457 354 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AC012511.1-201ENST00000608140 449 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.82□□□□□ -1.32
COL6A2P12110 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.82□□□□□ -1.32
COL6A2P12110 AC068234.2-201ENST00000619646 522 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AP005212.3-201ENST00000619964 528 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AC025287.2-201ENST00000621911 668 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AC019080.5-201ENST00000624891 757 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AC004014.2-201ENST00000623718 5122 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 AC110597.1-201ENST00000562669 3176 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.82□□□□□ -1.32
COL6A2P12110 AC025809.2-201ENST00000625085 1802 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 CDY19P-201ENST00000411668 1613 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 CDY18P-201ENST00000438294 1609 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL6A2P12110 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
COL6A2P12110 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL6A2P12110 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.82□□□□□ -1.32
COL6A2P12110 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.81□□□□□ -1.32
COL6A2P12110 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.81□□□□□ -1.32
COL6A2P12110 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.81□□□□□ -1.32
COL6A2P12110 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL6A2P12110 AC011815.2-201ENST00000618230 2021 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
COL6A2P12110 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
COL6A2P12110 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 RNU6-252P-201ENST00000363232 107 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 RNU4-81P-201ENST00000363561 144 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 RNA5SP512-201ENST00000364550 120 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.81□□□□□ -1.32
COL6A2P12110 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
COL6A2P12110 SKINT1L-201ENST00000401057 817 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.81□□□□□ -1.32
COL6A2P12110 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC6.81□□□□□ -1.32
COL6A2P12110 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 AC109638.1-201ENST00000417406 326 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 CYP4F34P-201ENST00000425951 481 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.81□□□□□ -1.32
COL6A2P12110 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.81□□□□□ -1.32
COL6A2P12110 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL6A2P12110 AC105052.2-201ENST00000434317 794 ntBASIC6.81□□□□□ -1.32
COL6A2P12110 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms