Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.8□□□□□ -1.48
UPK1AO00322 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.8□□□□□ -1.48
UPK1AO00322 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
UPK1AO00322 PSMA6P1-201ENST00000400275 741 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 RN7SKP146-201ENST00000410242 334 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.8□□□□□ -1.48
UPK1AO00322 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.8□□□□□ -1.48
UPK1AO00322 LDHAP2-201ENST00000437325 985 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 KRT8P51-201ENST00000438938 274 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 GAPDHP23-201ENST00000444823 993 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
UPK1AO00322 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.8□□□□□ -1.48
UPK1AO00322 AC073476.1-201ENST00000452854 407 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.8□□□□□ -1.48
UPK1AO00322 H3F3AP5-201ENST00000475267 429 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 SNX18P24-201ENST00000505249 671 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 HMGN1P16-201ENST00000508308 283 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.8□□□□□ -1.48
UPK1AO00322 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.8□□□□□ -1.48
UPK1AO00322 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 AC005479.3-201ENST00000602790 431 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 WBP1LP12-201ENST00000604449 331 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.8□□□□□ -1.48
UPK1AO00322 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 HTR1DP1-201ENST00000616500 888 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
UPK1AO00322 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.8□□□□□ -1.48
UPK1AO00322 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.8□□□□□ -1.48
UPK1AO00322 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.8□□□□□ -1.48
UPK1AO00322 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.8□□□□□ -1.48
UPK1AO00322 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UPK1AO00322 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
UPK1AO00322 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
UPK1AO00322 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.79□□□□□ -1.48
UPK1AO00322 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
UPK1AO00322 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.79□□□□□ -1.48
UPK1AO00322 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UPK1AO00322 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UPK1AO00322 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.79□□□□□ -1.48
UPK1AO00322 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.79□□□□□ -1.48
UPK1AO00322 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
UPK1AO00322 SNORD1C-201ENST00000363315 78 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 MIR191-201ENST00000384873 92 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UPK1AO00322 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UPK1AO00322 VN1R20P-201ENST00000425215 966 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 IGLV3-4-201ENST00000432300 244 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 RPS3AP38-201ENST00000435889 763 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.79□□□□□ -1.48
UPK1AO00322 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UPK1AO00322 KF459542.1-201ENST00000450908 553 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 HIGD1AP16-201ENST00000450986 258 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 SETP4-201ENST00000455717 868 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 AC093719.1-201ENST00000480427 441 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 PPP1R11P1-201ENST00000486095 376 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 RN7SL284P-201ENST00000498823 275 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.79□□□□□ -1.48
UPK1AO00322 Y_RNA.710-201ENST00000516975 110 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UPK1AO00322 AP001000.1-201ENST00000526843 742 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 AL049779.3-201ENST00000557141 606 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.79□□□□□ -1.48
UPK1AO00322 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.79□□□□□ -1.48
UPK1AO00322 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.79□□□□□ -1.48
UPK1AO00322 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.79□□□□□ -1.48
UPK1AO00322 ARGFXP2-201ENST00000579304 949 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.79□□□□□ -1.48
UPK1AO00322 AC020916.2-201ENST00000591242 360 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 MIR132-201ENST00000591554 101 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 AC022106.1-201ENST00000612834 766 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 AC012676.3-201ENST00000614983 479 ntBASIC5.79□□□□□ -1.48
UPK1AO00322 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.79□□□□□ -1.48
UPK1AO00322 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.79□□□□□ -1.48
UPK1AO00322 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.79□□□□□ -1.48
UPK1AO00322 AC010325.3-201ENST00000641084 394 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms