Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM4Q9C037 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM4Q9C037 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM4Q9C037 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM4Q9C037 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM4Q9C037 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM4Q9C037 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM4Q9C037 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM4Q9C037 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM4Q9C037 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 LCN1P2-201ENST00000372030 223 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 Z93019.1-201ENST00000416450 973 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 AC007365.2-201ENST00000428806 458 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 AL121578.2-201ENST00000448797 447 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 AL359839.1-201ENST00000451975 1160 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 SULT1D1P-201ENST00000458020 882 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 AC108751.3-201ENST00000461814 1020 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 RN7SL390P-201ENST00000470634 284 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 PPP1R2P6-201ENST00000478565 588 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 AC010442.1-201ENST00000515583 816 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM4Q9C037 AC007494.1-201ENST00000562293 760 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 AC002310.3-201ENST00000569728 723 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 AC004232.1-201ENST00000571388 208 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 AL138895.2-201ENST00000603019 178 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 AC004908.1-201ENST00000606572 541 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 SNX18P12-201ENST00000624821 759 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 AC007485.2-201ENST00000623493 1667 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM4Q9C037 LINC02019-201ENST00000608605 2060 ntBASIC6.41□□□□□ -1.38
TRIM4Q9C037 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM4Q9C037 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM4Q9C037 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM4Q9C037 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM4Q9C037 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM4Q9C037 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM4Q9C037 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM4Q9C037 AC092701.1-201ENST00000623627 1551 ntBASIC6.4□□□□□ -1.38
TRIM4Q9C037 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM4Q9C037 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM4Q9C037 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM4Q9C037 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM4Q9C037 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM4Q9C037 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 RPL5P2-201ENST00000429598 854 ntBASIC6.4□□□□□ -1.38
TRIM4Q9C037 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 OR6R1P-201ENST00000431838 940 ntBASIC6.4□□□□□ -1.38
TRIM4Q9C037 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 AC007679.3-201ENST00000434035 414 ntBASIC6.4□□□□□ -1.38
TRIM4Q9C037 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM4Q9C037 GAPDHP59-201ENST00000435908 267 ntBASIC6.4□□□□□ -1.38
TRIM4Q9C037 GAPDHP37-201ENST00000442317 968 ntBASIC6.4□□□□□ -1.38
TRIM4Q9C037 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM4Q9C037 Z83838.1-202ENST00000456225 839 ntBASIC6.4□□□□□ -1.38
TRIM4Q9C037 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 RN7SL187P-201ENST00000495587 303 ntBASIC6.4□□□□□ -1.38
TRIM4Q9C037 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 HSD3BP3-201ENST00000514706 994 ntBASIC6.4□□□□□ -1.38
TRIM4Q9C037 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 PPIAP6-201ENST00000557078 499 ntBASIC6.4□□□□□ -1.38
TRIM4Q9C037 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 AP003115.1-201ENST00000569849 463 ntBASIC6.4□□□□□ -1.38
TRIM4Q9C037 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms