Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC089984.3-201ENST00000552838 363 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC233266.2-201ENST00000567067 528 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC091133.5-201ENST00000603088 301 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AL356986.1-201ENST00000604085 341 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC025016.1-201ENST00000616746 682 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 API5P1-201ENST00000424316 1510 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 CUBNP3-201ENST00000457461 1784 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC062022.1-201ENST00000451026 1684 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 OLMALINC-203ENST00000641087 3779 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 RNA5SP382-201ENST00000363355 112 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC069282.1-201ENST00000411911 526 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 MTND4P11-201ENST00000417020 1058 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 OR52H2P-201ENST00000514607 902 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 HMGB1P46-201ENST00000520062 610 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 OR52K3P-201ENST00000531655 943 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC007068.2-201ENST00000543168 395 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AP003115.1-201ENST00000569849 463 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC090774.2-201ENST00000584708 322 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AL078624.2-201ENST00000605063 554 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC245389.2-201ENST00000616023 576 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC242843.1-201ENST00000618702 573 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AL035425.4-201ENST00000624509 1063 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC009452.1-201ENST00000640823 606 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 RBPJP6-201ENST00000411556 1431 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 AL132656.3-201ENST00000606384 1595 ntBASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM54Q9BYV2 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms