Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.26□□□□□ -1.41
VMP1Q96GC9 RN7SL83P-201ENST00000468131 297 ntBASIC6.26□□□□□ -1.41
VMP1Q96GC9 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VMP1Q96GC9 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
VMP1Q96GC9 AL390198.2-201ENST00000510553 222 ntBASIC6.26□□□□□ -1.41
VMP1Q96GC9 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.26□□□□□ -1.41
VMP1Q96GC9 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.26□□□□□ -1.41
VMP1Q96GC9 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
VMP1Q96GC9 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.26□□□□□ -1.41
VMP1Q96GC9 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.26□□□□□ -1.41
VMP1Q96GC9 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.26□□□□□ -1.41
VMP1Q96GC9 AC024267.2-201ENST00000582737 417 ntBASIC6.26□□□□□ -1.41
VMP1Q96GC9 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.26□□□□□ -1.41
VMP1Q96GC9 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.26□□□□□ -1.41
VMP1Q96GC9 AC005479.3-201ENST00000602790 431 ntBASIC6.26□□□□□ -1.41
VMP1Q96GC9 AC012175.1-201ENST00000603755 531 ntBASIC6.26□□□□□ -1.41
VMP1Q96GC9 AL035425.4-201ENST00000624509 1063 ntBASIC6.26□□□□□ -1.41
VMP1Q96GC9 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.26□□□□□ -1.41
VMP1Q96GC9 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VMP1Q96GC9 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.26□□□□□ -1.41
VMP1Q96GC9 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VMP1Q96GC9 DNM1P47-203ENST00000571780 12667 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 LYARP1-201ENST00000436977 1501 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 OR7E25P-201ENST00000344844 931 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 AL353625.1-202ENST00000366273 571 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 GAPDHP15-201ENST00000398586 975 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 RPS7P12-201ENST00000422385 582 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 AC113412.1-201ENST00000425840 504 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 MTCO1P51-201ENST00000427672 1060 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 NPM1P23-201ENST00000440193 849 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 MTND4LP12-201ENST00000448237 295 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 RPL26P30-201ENST00000453533 435 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 AKR1D1P1-201ENST00000457236 936 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 MTND6P32-201ENST00000457611 483 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 AC117395.1-201ENST00000487390 403 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 IGKV2-19-201ENST00000518132 283 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 AL445383.1-201ENST00000554689 874 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 AC091304.4-201ENST00000565703 620 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 AC091133.5-201ENST00000603088 301 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 AC211486.4-201ENST00000621495 113 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 AC061999.1-201ENST00000624454 177 ntBASIC6.25□□□□□ -1.41
VMP1Q96GC9 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.25□□□□□ -1.41
VMP1Q96GC9 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VMP1Q96GC9 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VMP1Q96GC9 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VMP1Q96GC9 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VMP1Q96GC9 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VMP1Q96GC9 TTC39DP-201ENST00000416781 1688 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 AC096992.2-201ENST00000609553 1684 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VMP1Q96GC9 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VMP1Q96GC9 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VMP1Q96GC9 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
VMP1Q96GC9 RNU6-697P-201ENST00000363348 107 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.24□□□□□ -1.41
VMP1Q96GC9 OR13C3-201ENST00000374781 1108 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VMP1Q96GC9 SNORA7A-201ENST00000384765 139 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 AL359694.1-201ENST00000403247 604 ntBASIC6.24□□□□□ -1.41
VMP1Q96GC9 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms