Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MTND2P12-201ENST00000417560 1252 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AC245884.2-201ENST00000426257 404 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AC094019.1-201ENST00000434678 472 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AL731534.1-201ENST00000434711 269 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AC245291.3-201ENST00000443400 292 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AC092601.1-201ENST00000444526 383 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 HIGD1AP16-201ENST00000450986 258 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 RBMY2HP-201ENST00000457961 720 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 RN7SL352P-201ENST00000466002 277 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 RN7SL104P-201ENST00000498686 293 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AC113191.1-201ENST00000517759 403 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 NATP-201ENST00000523491 878 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 MIR3157-201ENST00000578688 85 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 RNU4ATAC-201ENST00000580972 127 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AC063977.7-201ENST00000594454 337 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AC008555.7-201ENST00000605008 583 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AC073365.1-203ENST00000641055 1992 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AC020656.2-201ENST00000613291 5309 ntBASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 FUNDC2P3-201ENST00000334716 533 ntBASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AL096800.1-201ENST00000405326 893 ntBASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 RN7SKP144-201ENST00000411108 279 ntBASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 OR3D1P-201ENST00000438288 955 ntBASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AC234771.2-201ENST00000445718 597 ntBASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AC117500.1-201ENST00000497352 755 ntBASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AC022001.1-201ENST00000605193 268 ntBASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AC022106.1-201ENST00000612834 766 ntBASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AC069234.4-201ENST00000621276 412 ntBASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 AL122023.1-201ENST00000622847 530 ntBASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.32□□□□□ -1.4
CDKL3Q8IVW4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 SNX18P3-202ENST00000565670 1750 ntBASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AC011416.1-201ENST00000514947 1732 ntBASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 RPS26P38-201ENST00000414476 348 ntBASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 IGLV3-4-201ENST00000432300 244 ntBASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AL645936.1-201ENST00000441979 518 ntBASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 RPL23AP60-201ENST00000450011 454 ntBASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 SNORA74.1-201ENST00000516320 180 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms