Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 OR4H6P-201ENST00000563771 921 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 NDUFA5P11-201ENST00000567995 343 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 AL049840.5-201ENST00000602827 552 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 RN7SL261P-201ENST00000613441 282 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 AC097641.3-201ENST00000613523 464 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 uc_338.31-201ENST00000615595 186 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 MIR7854-201ENST00000620068 65 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 AC022726.2-201ENST00000634673 547 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.91□□□□□ -1.46
CCDC71Q8IV32 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 PSMD10P2-201ENST00000432890 672 ntBASIC5.91□□□□□ -1.46
CCDC71Q8IV32 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 GAPDHP33-201ENST00000443168 1013 ntBASIC5.91□□□□□ -1.46
CCDC71Q8IV32 RN7SL552P-201ENST00000462094 276 ntBASIC5.91□□□□□ -1.46
CCDC71Q8IV32 RPL12P24-201ENST00000474907 486 ntBASIC5.91□□□□□ -1.46
CCDC71Q8IV32 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 RPL41P2-201ENST00000544920 409 ntBASIC5.91□□□□□ -1.46
CCDC71Q8IV32 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 AC133552.4-201ENST00000576103 676 ntBASIC5.91□□□□□ -1.46
CCDC71Q8IV32 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.91□□□□□ -1.46
CCDC71Q8IV32 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 SMG1P5-202ENST00000529428 4219 ntBASIC5.91□□□□□ -1.46
CCDC71Q8IV32 SMG1P2-201ENST00000566127 4221 ntBASIC5.91□□□□□ -1.46
CCDC71Q8IV32 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 AC011455.2-201ENST00000599320 3336 ntBASIC5.91□□□□□ -1.46
CCDC71Q8IV32 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CCDC71Q8IV32 AOX3P-204ENST00000491025 2107 ntBASIC5.9□□□□□ -1.46
CCDC71Q8IV32 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 AC092724.1-201ENST00000624623 3397 ntBASIC5.9□□□□□ -1.46
CCDC71Q8IV32 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 RNU1-84P-201ENST00000365447 164 ntBASIC5.9□□□□□ -1.46
CCDC71Q8IV32 RN7SKP269-201ENST00000365545 319 ntBASIC5.9□□□□□ -1.46
CCDC71Q8IV32 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 RNA5SP122-201ENST00000384457 108 ntBASIC5.9□□□□□ -1.46
CCDC71Q8IV32 RBBP4P5-201ENST00000398583 1266 ntBASIC5.9□□□□□ -1.46
CCDC71Q8IV32 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 AC079807.1-201ENST00000429993 481 ntBASIC5.9□□□□□ -1.46
CCDC71Q8IV32 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 POU5F1P5-201ENST00000445059 658 ntBASIC5.9□□□□□ -1.46
CCDC71Q8IV32 COX4I1P2-201ENST00000447446 547 ntBASIC5.9□□□□□ -1.46
CCDC71Q8IV32 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 AC144530.1-201ENST00000452862 555 ntBASIC5.9□□□□□ -1.46
CCDC71Q8IV32 RPS27AP3-201ENST00000453803 454 ntBASIC5.9□□□□□ -1.46
CCDC71Q8IV32 AL022319.1-201ENST00000458183 1167 ntBASIC5.9□□□□□ -1.46
CCDC71Q8IV32 RN7SL221P-201ENST00000466190 281 ntBASIC5.9□□□□□ -1.46
CCDC71Q8IV32 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC71Q8IV32 AP002884.1-201ENST00000479691 655 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms