Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
VPS13CQ709C8 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 AC020898.1-201ENST00000474167 787 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 SCN5A-210ENST00000455624 7170 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 AL034549.2-201ENST00000618285 3373 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 RNU1-32P-201ENST00000363937 159 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 AL357752.1-201ENST00000412817 349 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 RPS6P23-201ENST00000413224 722 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 RPL23AP60-201ENST00000450011 454 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 RN7SL30P-201ENST00000488416 306 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 AP004607.2-201ENST00000533949 322 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 RBM22P1-201ENST00000578589 1214 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 TEK-202ENST00000406359 3935 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 GAPDHP24-201ENST00000328713 983 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 AC093162.1-201ENST00000419682 124 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 RPL7P45-201ENST00000455851 743 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 RPL7P39-201ENST00000481157 744 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 RNA5SP400-201ENST00000517155 111 ntBASIC4.77□□□□□ -1.65
VPS13CQ709C8 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS13CQ709C8 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS13CQ709C8 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 AC087516.1-201ENST00000561236 2428 ntBASIC4.76□□□□□ -1.65
VPS13CQ709C8 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS13CQ709C8 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS13CQ709C8 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms