Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AC099340.1-201ENST00000475247 599 ntBASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AC091874.2-201ENST00000505889 720 ntBASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 SCARNA21.2-201ENST00000516600 166 ntBASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 RNA5SP441-201ENST00000516809 88 ntBASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AL138895.2-201ENST00000603019 178 ntBASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AC025171.4-201ENST00000607250 1047 ntBASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AL137246.2-201ENST00000613439 662 ntBASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AL109924.4-201ENST00000623089 670 ntBASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AC114546.4-201ENST00000624413 369 ntBASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 MIR4302-201ENST00000638058 60 ntBASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRFAM7AQ494W8 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 UGT2B24P-201ENST00000514441 1597 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 RNA5SP140-201ENST00000364524 92 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 UBBP1-201ENST00000392399 473 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 NPM1P37-201ENST00000403105 874 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AC099782.1-201ENST00000425889 474 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 TVP23CP1-201ENST00000450317 639 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 H3F3AP5-201ENST00000475267 429 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AC092824.1-201ENST00000483524 576 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 HMGN1P16-201ENST00000508308 283 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 SNX18P23-201ENST00000510867 677 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AP001804.1-201ENST00000526868 919 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AC106785.4-201ENST00000569492 412 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AL078601.3-201ENST00000573303 535 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AL365181.4-201ENST00000609800 547 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AC018659.2-201ENST00000624690 715 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 AP001284.1-201ENST00000528393 2118 ntBASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRFAM7AQ494W8 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHRFAM7AQ494W8 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRFAM7AQ494W8 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRFAM7AQ494W8 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.59□□□□□ -1.51
CHRFAM7AQ494W8 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHRFAM7AQ494W8 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHRFAM7AQ494W8 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CHRFAM7AQ494W8 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRFAM7AQ494W8 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms