Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC127070.3-201ENST00000503695 3263 ntBASIC8.49□□□□□ -1.05
PTCH1Q13635 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.49□□□□□ -1.05
PTCH1Q13635 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
PTCH1Q13635 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.49□□□□□ -1.05
PTCH1Q13635 AL161901.1-201ENST00000624954 3425 ntBASIC8.49□□□□□ -1.05
PTCH1Q13635 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PTCH1Q13635 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PTCH1Q13635 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
PTCH1Q13635 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PTCH1Q13635 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PTCH1Q13635 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PTCH1Q13635 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC8.48□□□□□ -1.05
PTCH1Q13635 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC8.48□□□□□ -1.05
PTCH1Q13635 AC092967.1-201ENST00000449016 481 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 AC093166.4-201ENST00000457867 318 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC8.48□□□□□ -1.05
PTCH1Q13635 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.48□□□□□ -1.05
PTCH1Q13635 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC8.48□□□□□ -1.05
PTCH1Q13635 AC110056.1-201ENST00000525759 911 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 OR6M2P-201ENST00000529831 871 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 EIF4A2P5-201ENST00000529914 499 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC8.48□□□□□ -1.05
PTCH1Q13635 AC079395.2-201ENST00000610982 737 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 AL021918.2-201ENST00000613415 194 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 MIR7155-201ENST00000615925 56 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 AC037198.3-201ENST00000616754 526 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC8.48□□□□□ -1.05
PTCH1Q13635 AC012254.5-201ENST00000623573 478 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 CU639417.4-201ENST00000623928 207 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 AC004808.2-201ENST00000627965 773 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
PTCH1Q13635 PDZK1P1-202ENST00000425209 1350 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 EEF1A1P24-201ENST00000451469 1378 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PTCH1Q13635 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PTCH1Q13635 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC8.48□□□□□ -1.05
PTCH1Q13635 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PTCH1Q13635 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PTCH1Q13635 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.48□□□□□ -1.05
PTCH1Q13635 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC8.48□□□□□ -1.05
PTCH1Q13635 AL590763.1-201ENST00000398297 1545 ntBASIC8.48□□□□□ -1.05
PTCH1Q13635 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
PTCH1Q13635 RNU105B-201ENST00000364478 208 ntBASIC8.47□□□□□ -1.05
PTCH1Q13635 MIR585-201ENST00000384887 94 ntBASIC8.47□□□□□ -1.05
PTCH1Q13635 HMGB1P20-201ENST00000402555 677 ntBASIC8.47□□□□□ -1.05
PTCH1Q13635 AP000534.2-201ENST00000412729 568 ntBASIC8.47□□□□□ -1.05
PTCH1Q13635 CYP4F30P-202ENST00000420048 405 ntBASIC8.47□□□□□ -1.05
PTCH1Q13635 NME1P1-201ENST00000420914 382 ntBASIC8.47□□□□□ -1.05
PTCH1Q13635 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC8.47□□□□□ -1.05
PTCH1Q13635 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTCH1Q13635 AC074087.1-201ENST00000512059 724 ntBASIC8.47□□□□□ -1.05
PTCH1Q13635 CASP5-209ENST00000531367 879 ntTSL 5 BASIC8.47□□□□□ -1.05
PTCH1Q13635 AC027026.1-201ENST00000532323 742 ntBASIC8.47□□□□□ -1.05
PTCH1Q13635 RN7SL544P-201ENST00000617232 284 ntBASIC8.47□□□□□ -1.05
PTCH1Q13635 RN7SL763P-201ENST00000620922 284 ntBASIC8.47□□□□□ -1.05
PTCH1Q13635 LINC01963-201ENST00000562038 3148 ntBASIC8.47□□□□□ -1.05
PTCH1Q13635 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTCH1Q13635 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.47□□□□□ -1.05
PTCH1Q13635 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC8.47□□□□□ -1.05
PTCH1Q13635 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PTCH1Q13635 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PTCH1Q13635 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PTCH1Q13635 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC8.47□□□□□ -1.05
PTCH1Q13635 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTCH1Q13635 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PTCH1Q13635 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTCH1Q13635 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
PTCH1Q13635 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC8.47□□□□□ -1.05
PTCH1Q13635 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PTCH1Q13635 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.47□□□□□ -1.05
PTCH1Q13635 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
PTCH1Q13635 SELENOWP1-201ENST00000322792 252 ntBASIC8.46□□□□□ -1.05
PTCH1Q13635 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.46□□□□□ -1.05
PTCH1Q13635 RNU6-171P-201ENST00000384354 107 ntBASIC8.46□□□□□ -1.05
PTCH1Q13635 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC8.46□□□□□ -1.05
PTCH1Q13635 AC006455.6-201ENST00000426192 893 ntBASIC8.46□□□□□ -1.05
PTCH1Q13635 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC8.46□□□□□ -1.05
PTCH1Q13635 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
PTCH1Q13635 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC8.46□□□□□ -1.05
PTCH1Q13635 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC8.46□□□□□ -1.05
PTCH1Q13635 DPPA2P4-201ENST00000563717 878 ntBASIC8.46□□□□□ -1.05
PTCH1Q13635 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC8.46□□□□□ -1.05
PTCH1Q13635 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC8.46□□□□□ -1.05
PTCH1Q13635 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC8.46□□□□□ -1.05
PTCH1Q13635 AC022919.1-201ENST00000624979 626 ntBASIC8.46□□□□□ -1.05
PTCH1Q13635 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.46□□□□□ -1.05
PTCH1Q13635 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
PTCH1Q13635 AC025809.2-201ENST00000625085 1802 ntBASIC8.46□□□□□ -1.05
PTCH1Q13635 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
PTCH1Q13635 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
PTCH1Q13635 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
PTCH1Q13635 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
PTCH1Q13635 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
PTCH1Q13635 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
PTCH1Q13635 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTCH1Q13635 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTCH1Q13635 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.46□□□□□ -1.06
PTCH1Q13635 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTCH1Q13635 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTCH1Q13635 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms