Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 KCTD9P6-201ENST00000522306 950 ntBASIC6.08□□□□□ -1.44
RAE1P78406 AC113192.3-201ENST00000529152 742 ntBASIC6.08□□□□□ -1.44
RAE1P78406 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.08□□□□□ -1.44
RAE1P78406 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.08□□□□□ -1.44
RAE1P78406 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.08□□□□□ -1.44
RAE1P78406 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 AC104072.1-201ENST00000568817 668 ntBASIC6.08□□□□□ -1.44
RAE1P78406 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.08□□□□□ -1.44
RAE1P78406 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.08□□□□□ -1.44
RAE1P78406 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.08□□□□□ -1.44
RAE1P78406 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.08□□□□□ -1.44
RAE1P78406 ABI1P1-201ENST00000603375 1120 ntBASIC6.08□□□□□ -1.44
RAE1P78406 AC135178.6-201ENST00000605314 398 ntBASIC6.08□□□□□ -1.44
RAE1P78406 AL355802.4-201ENST00000607635 548 ntBASIC6.08□□□□□ -1.44
RAE1P78406 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.08□□□□□ -1.44
RAE1P78406 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.08□□□□□ -1.44
RAE1P78406 AL163051.2-201ENST00000618976 735 ntBASIC6.08□□□□□ -1.44
RAE1P78406 AL138955.1-201ENST00000622881 1040 ntBASIC6.08□□□□□ -1.44
RAE1P78406 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.08□□□□□ -1.44
RAE1P78406 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.08□□□□□ -1.44
RAE1P78406 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.08□□□□□ -1.44
RAE1P78406 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RAE1P78406 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
RAE1P78406 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.08□□□□□ -1.44
RAE1P78406 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.08□□□□□ -1.44
RAE1P78406 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.08□□□□□ -1.44
RAE1P78406 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.08□□□□□ -1.44
RAE1P78406 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RAE1P78406 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
RAE1P78406 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.07□□□□□ -1.44
RAE1P78406 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAE1P78406 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAE1P78406 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RAE1P78406 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAE1P78406 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RAE1P78406 AC110792.3-201ENST00000595906 1614 ntBASIC6.07□□□□□ -1.44
RAE1P78406 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.07□□□□□ -1.44
RAE1P78406 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.07□□□□□ -1.44
RAE1P78406 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RAE1P78406 SNORA63.3-201ENST00000362682 132 ntBASIC6.07□□□□□ -1.44
RAE1P78406 ARSFP1-201ENST00000398758 477 ntBASIC6.07□□□□□ -1.44
RAE1P78406 AL035405.1-201ENST00000400795 710 ntBASIC6.07□□□□□ -1.44
RAE1P78406 RSL24D1P1-201ENST00000404972 493 ntBASIC6.07□□□□□ -1.44
RAE1P78406 RN7SKP221-201ENST00000410420 301 ntBASIC6.07□□□□□ -1.44
RAE1P78406 AC116036.1-201ENST00000412199 367 ntBASIC6.07□□□□□ -1.44
RAE1P78406 UBE2V1P14-201ENST00000415815 558 ntBASIC6.07□□□□□ -1.44
RAE1P78406 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.07□□□□□ -1.44
RAE1P78406 AL139184.1-202ENST00000422303 222 ntBASIC6.07□□□□□ -1.44
RAE1P78406 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.07□□□□□ -1.44
RAE1P78406 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.07□□□□□ -1.44
RAE1P78406 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.07□□□□□ -1.44
RAE1P78406 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.07□□□□□ -1.44
RAE1P78406 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.07□□□□□ -1.44
RAE1P78406 RPL31P11-202ENST00000454082 372 ntBASIC6.07□□□□□ -1.44
RAE1P78406 TVP23BP2-201ENST00000455082 615 ntBASIC6.07□□□□□ -1.44
RAE1P78406 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.07□□□□□ -1.44
RAE1P78406 ATP5G1P3-201ENST00000463301 410 ntBASIC6.07□□□□□ -1.44
RAE1P78406 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RAE1P78406 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.07□□□□□ -1.44
RAE1P78406 AC138701.1-201ENST00000524329 714 ntBASIC6.07□□□□□ -1.44
RAE1P78406 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.07□□□□□ -1.44
RAE1P78406 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.07□□□□□ -1.44
RAE1P78406 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.07□□□□□ -1.44
RAE1P78406 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.07□□□□□ -1.44
RAE1P78406 AC010547.7-201ENST00000570323 333 ntBASIC6.07□□□□□ -1.44
RAE1P78406 MIR3189-201ENST00000578735 73 ntBASIC6.07□□□□□ -1.44
RAE1P78406 AC245884.10-201ENST00000597355 337 ntBASIC6.07□□□□□ -1.44
RAE1P78406 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RAE1P78406 AC016597.2-201ENST00000613256 341 ntBASIC6.07□□□□□ -1.44
RAE1P78406 AL137246.2-201ENST00000613439 662 ntBASIC6.07□□□□□ -1.44
RAE1P78406 MIR6883-201ENST00000614952 78 ntBASIC6.07□□□□□ -1.44
RAE1P78406 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RAE1P78406 AC090506.2-201ENST00000624521 419 ntBASIC6.07□□□□□ -1.44
RAE1P78406 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.07□□□□□ -1.44
RAE1P78406 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAE1P78406 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAE1P78406 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAE1P78406 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RAE1P78406 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAE1P78406 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAE1P78406 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.07□□□□□ -1.44
RAE1P78406 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.06□□□□□ -1.44
RAE1P78406 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.06□□□□□ -1.44
RAE1P78406 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RAE1P78406 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RAE1P78406 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
RAE1P78406 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RAE1P78406 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
RAE1P78406 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms