Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPL39P62891 AC022325.1-201ENST00000502748 2199 ntBASIC4.23□□□□□ -1.73
RPL39P62891 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPL39P62891 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPL39P62891 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPL39P62891 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
RPL39P62891 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPL39P62891 VIM2P-201ENST00000402383 1294 ntBASIC4.23□□□□□ -1.73
RPL39P62891 RN7SKP166-201ENST00000410812 305 ntBASIC4.23□□□□□ -1.73
RPL39P62891 AC245096.1-201ENST00000413104 546 ntBASIC4.23□□□□□ -1.73
RPL39P62891 CDC42P6-201ENST00000421246 576 ntBASIC4.23□□□□□ -1.73
RPL39P62891 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.23□□□□□ -1.73
RPL39P62891 MRPS21P2-201ENST00000424704 264 ntBASIC4.23□□□□□ -1.73
RPL39P62891 E2F6P1-201ENST00000428850 745 ntBASIC4.23□□□□□ -1.73
RPL39P62891 BX276092.6-201ENST00000430476 250 ntBASIC4.23□□□□□ -1.73
RPL39P62891 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.23□□□□□ -1.73
RPL39P62891 PPIAP10-201ENST00000438675 458 ntBASIC4.23□□□□□ -1.73
RPL39P62891 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPL39P62891 E2F6P3-201ENST00000441743 743 ntBASIC4.23□□□□□ -1.73
RPL39P62891 COL11A2P1-205ENST00000441798 676 ntBASIC4.23□□□□□ -1.73
RPL39P62891 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPL39P62891 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.23□□□□□ -1.73
RPL39P62891 PCMTD1P3-201ENST00000451824 472 ntBASIC4.23□□□□□ -1.73
RPL39P62891 RSU1P1-201ENST00000453416 441 ntBASIC4.23□□□□□ -1.73
RPL39P62891 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.23□□□□□ -1.73
RPL39P62891 RPL12P39-201ENST00000455456 496 ntBASIC4.23□□□□□ -1.73
RPL39P62891 BX276092.8-201ENST00000455722 250 ntBASIC4.23□□□□□ -1.73
RPL39P62891 RN7SL326P-201ENST00000477493 296 ntBASIC4.23□□□□□ -1.73
RPL39P62891 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.23□□□□□ -1.73
RPL39P62891 AC079080.1-201ENST00000479841 822 ntBASIC4.23□□□□□ -1.73
RPL39P62891 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC4.23□□□□□ -1.73
RPL39P62891 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC4.23□□□□□ -1.73
RPL39P62891 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC4.23□□□□□ -1.73
RPL39P62891 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.23□□□□□ -1.73
RPL39P62891 AC111000.6-201ENST00000514471 709 ntBASIC4.23□□□□□ -1.73
RPL39P62891 AC096661.1-201ENST00000515870 822 ntBASIC4.23□□□□□ -1.73
RPL39P62891 IGKV1D-32-201ENST00000517449 318 ntBASIC4.23□□□□□ -1.73
RPL39P62891 RBMS2P1-201ENST00000525031 1226 ntBASIC4.23□□□□□ -1.73
RPL39P62891 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.23□□□□□ -1.73
RPL39P62891 MIR3187-201ENST00000583431 70 ntBASIC4.23□□□□□ -1.73
RPL39P62891 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.23□□□□□ -1.73
RPL39P62891 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.23□□□□□ -1.73
RPL39P62891 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.23□□□□□ -1.73
RPL39P62891 AC008555.7-201ENST00000605008 583 ntBASIC4.23□□□□□ -1.73
RPL39P62891 RNA5SP439-201ENST00000617595 124 ntBASIC4.23□□□□□ -1.73
RPL39P62891 AL137058.3-201ENST00000624531 3099 ntBASIC4.23□□□□□ -1.73
RPL39P62891 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RPL39P62891 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.23□□□□□ -1.73
RPL39P62891 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPL39P62891 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPL39P62891 AL022311.1-201ENST00000623726 19416 ntBASIC4.23□□□□□ -1.73
RPL39P62891 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.23□□□□□ -1.73
RPL39P62891 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.23□□□□□ -1.73
RPL39P62891 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
RPL39P62891 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 GVINP1-202ENST00000531871 7271 ntBASIC4.22□□□□□ -1.73
RPL39P62891 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC4.22□□□□□ -1.73
RPL39P62891 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC4.22□□□□□ -1.73
RPL39P62891 AC079248.1-201ENST00000427568 1546 ntBASIC4.22□□□□□ -1.73
RPL39P62891 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 RNA5SP308-201ENST00000362532 115 ntBASIC4.22□□□□□ -1.73
RPL39P62891 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.22□□□□□ -1.73
RPL39P62891 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.22□□□□□ -1.73
RPL39P62891 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.22□□□□□ -1.73
RPL39P62891 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.22□□□□□ -1.73
RPL39P62891 GRPEL2P2-201ENST00000421856 670 ntBASIC4.22□□□□□ -1.73
RPL39P62891 AL354766.1-201ENST00000423396 542 ntBASIC4.22□□□□□ -1.73
RPL39P62891 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.22□□□□□ -1.73
RPL39P62891 AC099670.2-201ENST00000435130 321 ntBASIC4.22□□□□□ -1.73
RPL39P62891 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.22□□□□□ -1.73
RPL39P62891 OR52U1P-201ENST00000439752 923 ntBASIC4.22□□□□□ -1.73
RPL39P62891 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.22□□□□□ -1.73
RPL39P62891 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.22□□□□□ -1.73
RPL39P62891 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.22□□□□□ -1.73
RPL39P62891 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.22□□□□□ -1.73
RPL39P62891 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.22□□□□□ -1.73
RPL39P62891 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.22□□□□□ -1.73
RPL39P62891 AC093664.1-201ENST00000511779 289 ntBASIC4.22□□□□□ -1.73
RPL39P62891 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.22□□□□□ -1.73
RPL39P62891 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC4.22□□□□□ -1.73
RPL39P62891 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.22□□□□□ -1.73
RPL39P62891 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC4.22□□□□□ -1.73
RPL39P62891 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.22□□□□□ -1.73
RPL39P62891 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RPL39P62891 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.22□□□□□ -1.73
RPL39P62891 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
RPL39P62891 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RPL39P62891 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RPL39P62891 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms