Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 WBP11P1-201ENST00000562560 1931 ntBASIC6.37□□□□□ -1.39
CDH4P55283 AP001541.1-201ENST00000623322 1904 ntBASIC6.37□□□□□ -1.39
CDH4P55283 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
CDH4P55283 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH4P55283 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH4P55283 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.36□□□□□ -1.39
CDH4P55283 AC011416.1-201ENST00000514947 1732 ntBASIC6.36□□□□□ -1.39
CDH4P55283 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH4P55283 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH4P55283 HSPD1P9-201ENST00000420325 1636 ntBASIC6.36□□□□□ -1.39
CDH4P55283 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH4P55283 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH4P55283 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CDH4P55283 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH4P55283 AC092692.1-201ENST00000623625 2595 ntBASIC6.36□□□□□ -1.39
CDH4P55283 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH4P55283 AC104966.1-201ENST00000467010 1464 ntBASIC6.36□□□□□ -1.39
CDH4P55283 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CDH4P55283 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CDH4P55283 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH4P55283 LINC01616-201ENST00000561816 2280 ntBASIC6.36□□□□□ -1.39
CDH4P55283 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH4P55283 SNORD8-201ENST00000363915 110 ntBASIC6.36□□□□□ -1.39
CDH4P55283 RNU6-316P-201ENST00000391027 107 ntBASIC6.36□□□□□ -1.39
CDH4P55283 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CDH4P55283 CXADRP1-201ENST00000398098 1095 ntBASIC6.36□□□□□ -1.39
CDH4P55283 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH4P55283 AL353626.3-201ENST00000413399 657 ntBASIC6.36□□□□□ -1.39
CDH4P55283 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH4P55283 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH4P55283 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH4P55283 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.36□□□□□ -1.39
CDH4P55283 AC007679.3-201ENST00000434035 414 ntBASIC6.36□□□□□ -1.39
CDH4P55283 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH4P55283 AC097463.1-201ENST00000447288 481 ntBASIC6.36□□□□□ -1.39
CDH4P55283 AC009963.3-201ENST00000458090 486 ntBASIC6.36□□□□□ -1.39
CDH4P55283 RN7SL221P-201ENST00000466190 281 ntBASIC6.36□□□□□ -1.39
CDH4P55283 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.36□□□□□ -1.39
CDH4P55283 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH4P55283 RNA5SP434-201ENST00000516647 121 ntBASIC6.36□□□□□ -1.39
CDH4P55283 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH4P55283 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH4P55283 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.36□□□□□ -1.39
CDH4P55283 GLYATL1P2-202ENST00000588046 902 ntBASIC6.36□□□□□ -1.39
CDH4P55283 AC092681.3-201ENST00000609463 678 ntBASIC6.36□□□□□ -1.39
CDH4P55283 CXADRP3-202ENST00000617265 1100 ntBASIC6.36□□□□□ -1.39
CDH4P55283 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
CDH4P55283 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH4P55283 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.36□□□□□ -1.39
CDH4P55283 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH4P55283 AC005034.3-201ENST00000604845 1747 ntBASIC6.36□□□□□ -1.39
CDH4P55283 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH4P55283 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CDH4P55283 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH4P55283 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH4P55283 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CDH4P55283 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH4P55283 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.35□□□□□ -1.39
CDH4P55283 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CDH4P55283 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH4P55283 SNORA21-201ENST00000362423 132 ntBASIC6.35□□□□□ -1.39
CDH4P55283 RNA5SP110-201ENST00000362638 115 ntBASIC6.35□□□□□ -1.39
CDH4P55283 RNA5SP156-201ENST00000410250 110 ntBASIC6.35□□□□□ -1.39
CDH4P55283 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH4P55283 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH4P55283 AC002553.3-201ENST00000453002 341 ntBASIC6.35□□□□□ -1.39
CDH4P55283 RPS27AP3-201ENST00000453803 454 ntBASIC6.35□□□□□ -1.39
CDH4P55283 PPIAP7-201ENST00000454070 489 ntBASIC6.35□□□□□ -1.39
CDH4P55283 AC103563.5-201ENST00000455643 364 ntBASIC6.35□□□□□ -1.39
CDH4P55283 AC002075.1-201ENST00000457396 676 ntBASIC6.35□□□□□ -1.39
CDH4P55283 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH4P55283 RN7SL165P-201ENST00000477476 291 ntBASIC6.35□□□□□ -1.39
CDH4P55283 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH4P55283 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.35□□□□□ -1.39
CDH4P55283 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH4P55283 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH4P55283 AP000620.1-201ENST00000527147 504 ntBASIC6.35□□□□□ -1.39
CDH4P55283 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH4P55283 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH4P55283 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH4P55283 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.35□□□□□ -1.39
CDH4P55283 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.35□□□□□ -1.39
CDH4P55283 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.35□□□□□ -1.39
CDH4P55283 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH4P55283 AC137695.1-201ENST00000604126 489 ntBASIC6.35□□□□□ -1.39
CDH4P55283 AC008555.7-201ENST00000605008 583 ntBASIC6.35□□□□□ -1.39
CDH4P55283 AL021368.3-201ENST00000607119 578 ntBASIC6.35□□□□□ -1.39
CDH4P55283 OR7A1P-202ENST00000641542 1158 ntBASIC6.35□□□□□ -1.39
CDH4P55283 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH4P55283 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH4P55283 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH4P55283 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH4P55283 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH4P55283 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
CDH4P55283 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CDH4P55283 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms