Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.48□□□□□ -1.37
HADHAP40939 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
HADHAP40939 BRAFP1-201ENST00000445336 2703 ntBASIC6.48□□□□□ -1.37
HADHAP40939 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.48□□□□□ -1.37
HADHAP40939 RNA5SP115-201ENST00000411160 107 ntBASIC6.48□□□□□ -1.37
HADHAP40939 RNU2-18P-201ENST00000411224 162 ntBASIC6.48□□□□□ -1.37
HADHAP40939 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.48□□□□□ -1.37
HADHAP40939 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.48□□□□□ -1.37
HADHAP40939 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.48□□□□□ -1.37
HADHAP40939 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.48□□□□□ -1.37
HADHAP40939 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
HADHAP40939 AC097523.2-201ENST00000435551 652 ntBASIC6.48□□□□□ -1.37
HADHAP40939 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.48□□□□□ -1.37
HADHAP40939 GAPDHP37-201ENST00000442317 968 ntBASIC6.48□□□□□ -1.37
HADHAP40939 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.48□□□□□ -1.37
HADHAP40939 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.48□□□□□ -1.37
HADHAP40939 AC104849.1-201ENST00000462623 405 ntBASIC6.48□□□□□ -1.37
HADHAP40939 RN7SL413P-201ENST00000482700 297 ntBASIC6.48□□□□□ -1.37
HADHAP40939 RN7SL649P-201ENST00000496974 275 ntBASIC6.48□□□□□ -1.37
HADHAP40939 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HADHAP40939 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.48□□□□□ -1.37
HADHAP40939 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.48□□□□□ -1.37
HADHAP40939 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.48□□□□□ -1.37
HADHAP40939 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.48□□□□□ -1.37
HADHAP40939 OR9G2P-201ENST00000533326 880 ntBASIC6.48□□□□□ -1.37
HADHAP40939 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
HADHAP40939 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HADHAP40939 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.48□□□□□ -1.37
HADHAP40939 NPM1P5-201ENST00000557228 838 ntBASIC6.48□□□□□ -1.37
HADHAP40939 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.48□□□□□ -1.37
HADHAP40939 AC023968.1-201ENST00000560719 475 ntBASIC6.48□□□□□ -1.37
HADHAP40939 AC138207.8-204ENST00000579588 527 ntBASIC6.48□□□□□ -1.37
HADHAP40939 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.48□□□□□ -1.37
HADHAP40939 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.48□□□□□ -1.37
HADHAP40939 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.48□□□□□ -1.37
HADHAP40939 AC073389.3-201ENST00000609434 935 ntBASIC6.48□□□□□ -1.37
HADHAP40939 MIR6889-201ENST00000613185 59 ntBASIC6.48□□□□□ -1.37
HADHAP40939 AC015819.1-201ENST00000613588 663 ntBASIC6.48□□□□□ -1.37
HADHAP40939 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HADHAP40939 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HADHAP40939 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
HADHAP40939 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.48□□□□□ -1.37
HADHAP40939 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
HADHAP40939 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HADHAP40939 AC005702.3-201ENST00000585345 1447 ntBASIC6.48□□□□□ -1.37
HADHAP40939 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HADHAP40939 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HADHAP40939 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.48□□□□□ -1.37
HADHAP40939 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HADHAP40939 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.47□□□□□ -1.37
HADHAP40939 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.47□□□□□ -1.37
HADHAP40939 SAGE3P-201ENST00000619800 1635 ntBASIC6.47□□□□□ -1.37
HADHAP40939 AC011815.2-201ENST00000618230 2021 ntBASIC6.47□□□□□ -1.37
HADHAP40939 AC093909.5-201ENST00000621839 1799 ntBASIC6.47□□□□□ -1.37
HADHAP40939 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
HADHAP40939 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HADHAP40939 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.47□□□□□ -1.37
HADHAP40939 OR7A2P-201ENST00000304105 930 ntBASIC6.47□□□□□ -1.37
HADHAP40939 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.47□□□□□ -1.37
HADHAP40939 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HADHAP40939 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HADHAP40939 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HADHAP40939 RN7SKP221-201ENST00000410420 301 ntBASIC6.47□□□□□ -1.37
HADHAP40939 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.47□□□□□ -1.37
HADHAP40939 RPL12P43-201ENST00000420608 499 ntBASIC6.47□□□□□ -1.37
HADHAP40939 NME1P1-201ENST00000420914 382 ntBASIC6.47□□□□□ -1.37
HADHAP40939 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.47□□□□□ -1.37
HADHAP40939 AL031681.1-201ENST00000443304 400 ntBASIC6.47□□□□□ -1.37
HADHAP40939 AC044810.1-201ENST00000480271 711 ntBASIC6.47□□□□□ -1.37
HADHAP40939 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HADHAP40939 AC114728.1-201ENST00000488289 483 ntBASIC6.47□□□□□ -1.37
HADHAP40939 AC106800.3-201ENST00000511389 308 ntBASIC6.47□□□□□ -1.37
HADHAP40939 IGKV1D-22-201ENST00000518953 324 ntBASIC6.47□□□□□ -1.37
HADHAP40939 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.47□□□□□ -1.37
HADHAP40939 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.47□□□□□ -1.37
HADHAP40939 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.47□□□□□ -1.37
HADHAP40939 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.47□□□□□ -1.37
HADHAP40939 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.47□□□□□ -1.37
HADHAP40939 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
HADHAP40939 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.47□□□□□ -1.37
HADHAP40939 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.47□□□□□ -1.37
HADHAP40939 MIR3157-201ENST00000578688 85 ntBASIC6.47□□□□□ -1.37
HADHAP40939 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.47□□□□□ -1.37
HADHAP40939 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.47□□□□□ -1.37
HADHAP40939 AC100814.1-201ENST00000606963 623 ntBASIC6.47□□□□□ -1.37
HADHAP40939 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HADHAP40939 AL445649.1-201ENST00000615941 691 ntBASIC6.47□□□□□ -1.37
HADHAP40939 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.47□□□□□ -1.37
HADHAP40939 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.47□□□□□ -1.37
HADHAP40939 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HADHAP40939 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HADHAP40939 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.47□□□□□ -1.37
HADHAP40939 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HADHAP40939 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.47□□□□□ -1.37
HADHAP40939 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.46□□□□□ -1.37
HADHAP40939 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.46□□□□□ -1.37
HADHAP40939 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.46□□□□□ -1.37
HADHAP40939 AC093297.3-201ENST00000607056 2517 ntBASIC6.46□□□□□ -1.37
HADHAP40939 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HADHAP40939 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms