Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.85□□□□□ -1.31
BDNFP23560 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.85□□□□□ -1.31
BDNFP23560 RPL31P53-201ENST00000457065 348 ntBASIC6.85□□□□□ -1.31
BDNFP23560 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
BDNFP23560 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.85□□□□□ -1.31
BDNFP23560 OR7E22P-201ENST00000478335 1035 ntBASIC6.85□□□□□ -1.31
BDNFP23560 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BDNFP23560 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BDNFP23560 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
BDNFP23560 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.85□□□□□ -1.31
BDNFP23560 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.85□□□□□ -1.31
BDNFP23560 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.85□□□□□ -1.31
BDNFP23560 AC024405.1-201ENST00000532521 1042 ntBASIC6.85□□□□□ -1.31
BDNFP23560 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.85□□□□□ -1.31
BDNFP23560 AC026898.1-201ENST00000586404 571 ntBASIC6.85□□□□□ -1.31
BDNFP23560 FAM60CP-201ENST00000591086 664 ntBASIC6.85□□□□□ -1.31
BDNFP23560 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.85□□□□□ -1.31
BDNFP23560 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.85□□□□□ -1.31
BDNFP23560 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BDNFP23560 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.85□□□□□ -1.31
BDNFP23560 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
BDNFP23560 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
BDNFP23560 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BDNFP23560 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BDNFP23560 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
BDNFP23560 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.85□□□□□ -1.31
BDNFP23560 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
BDNFP23560 CAP1P2-201ENST00000417455 1409 ntBASIC6.84□□□□□ -1.31
BDNFP23560 AC027279.1-201ENST00000568885 4284 ntBASIC6.84□□□□□ -1.31
BDNFP23560 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
BDNFP23560 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
BDNFP23560 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
BDNFP23560 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.84□□□□□ -1.31
BDNFP23560 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
BDNFP23560 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
BDNFP23560 AC096921.2-201ENST00000561507 1916 ntBASIC6.84□□□□□ -1.31
BDNFP23560 SAGE3P-201ENST00000619800 1635 ntBASIC6.84□□□□□ -1.31
BDNFP23560 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
BDNFP23560 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.84□□□□□ -1.31
BDNFP23560 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
BDNFP23560 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
BDNFP23560 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
BDNFP23560 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.84□□□□□ -1.31
BDNFP23560 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
BDNFP23560 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
BDNFP23560 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
BDNFP23560 RNU6-386P-201ENST00000362650 107 ntBASIC6.84□□□□□ -1.31
BDNFP23560 RN7SKP186-201ENST00000365371 303 ntBASIC6.84□□□□□ -1.31
BDNFP23560 RN7SKP86-201ENST00000410454 332 ntBASIC6.84□□□□□ -1.31
BDNFP23560 AL139415.1-201ENST00000424862 352 ntBASIC6.84□□□□□ -1.31
BDNFP23560 DSTNP5-201ENST00000427921 523 ntBASIC6.84□□□□□ -1.31
BDNFP23560 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.84□□□□□ -1.31
BDNFP23560 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
BDNFP23560 AC003989.1-201ENST00000434569 565 ntBASIC6.84□□□□□ -1.31
BDNFP23560 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.84□□□□□ -1.31
BDNFP23560 AC026782.2-201ENST00000510845 636 ntBASIC6.84□□□□□ -1.31
BDNFP23560 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.84□□□□□ -1.31
BDNFP23560 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.84□□□□□ -1.31
BDNFP23560 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.84□□□□□ -1.31
BDNFP23560 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.84□□□□□ -1.31
BDNFP23560 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.84□□□□□ -1.31
BDNFP23560 IGLV3-6-201ENST00000523937 250 ntBASIC6.84□□□□□ -1.31
BDNFP23560 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
BDNFP23560 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.84□□□□□ -1.31
BDNFP23560 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.84□□□□□ -1.31
BDNFP23560 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.84□□□□□ -1.31
BDNFP23560 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.84□□□□□ -1.31
BDNFP23560 AC122134.1-201ENST00000565664 1104 ntBASIC6.84□□□□□ -1.31
BDNFP23560 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.84□□□□□ -1.31
BDNFP23560 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.84□□□□□ -1.31
BDNFP23560 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.84□□□□□ -1.31
BDNFP23560 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.84□□□□□ -1.31
BDNFP23560 RN7SL230P-201ENST00000580835 303 ntBASIC6.84□□□□□ -1.31
BDNFP23560 AL078623.1-201ENST00000602702 907 ntBASIC6.84□□□□□ -1.31
BDNFP23560 AC073046.2-201ENST00000604756 527 ntBASIC6.84□□□□□ -1.31
BDNFP23560 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.84□□□□□ -1.31
BDNFP23560 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.84□□□□□ -1.31
BDNFP23560 AL121936.2-201ENST00000641935 662 ntBASIC6.84□□□□□ -1.31
BDNFP23560 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.84□□□□□ -1.31
BDNFP23560 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
BDNFP23560 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
BDNFP23560 AL591848.4-201ENST00000567832 3472 ntBASIC6.84□□□□□ -1.31
BDNFP23560 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
BDNFP23560 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.84□□□□□ -1.31
BDNFP23560 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.84□□□□□ -1.31
BDNFP23560 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
BDNFP23560 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.84□□□□□ -1.32
BDNFP23560 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
BDNFP23560 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
BDNFP23560 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.83□□□□□ -1.32
BDNFP23560 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
BDNFP23560 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.83□□□□□ -1.32
BDNFP23560 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.83□□□□□ -1.32
BDNFP23560 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.83□□□□□ -1.32
BDNFP23560 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
BDNFP23560 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
BDNFP23560 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
BDNFP23560 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.83□□□□□ -1.32
BDNFP23560 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
BDNFP23560 RNU6-891P-201ENST00000384280 111 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms