Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC236972.4-201ENST00000458091 963 ntBASIC6.25□□□□□ -1.41
CDH3P22223 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH3P22223 MTCO3P42-201ENST00000509488 518 ntBASIC6.25□□□□□ -1.41
CDH3P22223 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.25□□□□□ -1.41
CDH3P22223 MTCO3P39-201ENST00000514812 518 ntBASIC6.25□□□□□ -1.41
CDH3P22223 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH3P22223 IGLV3-6-201ENST00000523937 250 ntBASIC6.25□□□□□ -1.41
CDH3P22223 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH3P22223 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.25□□□□□ -1.41
CDH3P22223 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH3P22223 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.25□□□□□ -1.41
CDH3P22223 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH3P22223 AC125494.2-201ENST00000602431 657 ntBASIC6.25□□□□□ -1.41
CDH3P22223 AL360012.1-201ENST00000602813 131 ntBASIC6.25□□□□□ -1.41
CDH3P22223 AL953862.2-201ENST00000603089 820 ntBASIC6.25□□□□□ -1.41
CDH3P22223 AL157899.1-201ENST00000604110 936 ntBASIC6.25□□□□□ -1.41
CDH3P22223 AL359091.2-201ENST00000609303 556 ntBASIC6.25□□□□□ -1.41
CDH3P22223 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
CDH3P22223 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH3P22223 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH3P22223 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH3P22223 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.25□□□□□ -1.41
CDH3P22223 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH3P22223 AL731556.1-201ENST00000394628 3711 ntBASIC6.25□□□□□ -1.41
CDH3P22223 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CDH3P22223 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CDH3P22223 WDR95P-201ENST00000425638 1542 ntBASIC6.25□□□□□ -1.41
CDH3P22223 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH3P22223 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH3P22223 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CDH3P22223 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.24□□□□□ -1.41
CDH3P22223 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH3P22223 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDH3P22223 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CDH3P22223 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH3P22223 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
CDH3P22223 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.24□□□□□ -1.41
CDH3P22223 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH3P22223 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH3P22223 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.24□□□□□ -1.41
CDH3P22223 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.24□□□□□ -1.41
CDH3P22223 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH3P22223 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CDH3P22223 RPL11P4-201ENST00000332269 436 ntBASIC6.24□□□□□ -1.41
CDH3P22223 STAG3L4-201ENST00000352103 530 ntBASIC6.24□□□□□ -1.41
CDH3P22223 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH3P22223 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDH3P22223 AL391419.1-201ENST00000398901 1275 ntBASIC6.24□□□□□ -1.41
CDH3P22223 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH3P22223 ARMC4P1-201ENST00000438905 707 ntBASIC6.24□□□□□ -1.41
CDH3P22223 AL359839.1-201ENST00000451975 1160 ntBASIC6.24□□□□□ -1.41
CDH3P22223 AL139156.3-201ENST00000454802 394 ntBASIC6.24□□□□□ -1.41
CDH3P22223 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH3P22223 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH3P22223 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.24□□□□□ -1.41
CDH3P22223 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH3P22223 H3F3AP5-201ENST00000475267 429 ntBASIC6.24□□□□□ -1.41
CDH3P22223 RNA5SP418-201ENST00000515951 117 ntBASIC6.24□□□□□ -1.41
CDH3P22223 SNORA74.1-201ENST00000516320 180 ntBASIC6.24□□□□□ -1.41
CDH3P22223 CYCSP25-201ENST00000525280 316 ntBASIC6.24□□□□□ -1.41
CDH3P22223 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.24□□□□□ -1.41
CDH3P22223 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.24□□□□□ -1.41
CDH3P22223 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH3P22223 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.24□□□□□ -1.41
CDH3P22223 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH3P22223 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH3P22223 MIR3154-201ENST00000577829 84 ntBASIC6.24□□□□□ -1.41
CDH3P22223 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH3P22223 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH3P22223 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.24□□□□□ -1.41
CDH3P22223 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH3P22223 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH3P22223 LINC02495-203ENST00000636704 242 ntBASIC6.24□□□□□ -1.41
CDH3P22223 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH3P22223 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH3P22223 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH3P22223 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.24□□□□□ -1.41
CDH3P22223 AC140134.1-201ENST00000511830 3544 ntBASIC6.24□□□□□ -1.41
CDH3P22223 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH3P22223 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
CDH3P22223 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 RPL31P11-201ENST00000426558 1558 ntBASIC6.23□□□□□ -1.41
CDH3P22223 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.23□□□□□ -1.41
CDH3P22223 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 GTF2IP4-201ENST00000453092 2054 ntBASIC6.23□□□□□ -1.41
CDH3P22223 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH3P22223 AC107977.1-201ENST00000355745 939 ntBASIC6.23□□□□□ -1.41
CDH3P22223 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH3P22223 RPL24P2-201ENST00000421023 475 ntBASIC6.23□□□□□ -1.41
CDH3P22223 RPL23AP85-201ENST00000421838 433 ntBASIC6.23□□□□□ -1.41
CDH3P22223 AC007568.1-201ENST00000422912 471 ntBASIC6.23□□□□□ -1.41
CDH3P22223 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH3P22223 VN1R20P-201ENST00000425215 966 ntBASIC6.23□□□□□ -1.41
CDH3P22223 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH3P22223 BX679664.2-201ENST00000439282 283 ntBASIC6.23□□□□□ -1.41
CDH3P22223 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms