Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC007842.1-201ENST00000597336 2039 ntBASIC10.41□□□□□ -0.74
TOP2AP11388 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TOP2AP11388 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC10.41□□□□□ -0.74
TOP2AP11388 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TOP2AP11388 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TOP2AP11388 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC10.4□□□□□ -0.74
TOP2AP11388 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
TOP2AP11388 AC105749.1-201ENST00000631338 2008 ntBASIC10.4□□□□□ -0.74
TOP2AP11388 SPTLC1P2-201ENST00000407089 121 ntBASIC10.4□□□□□ -0.74
TOP2AP11388 GABARAPL3-201ENST00000412799 354 ntBASIC10.4□□□□□ -0.74
TOP2AP11388 TNPO1P1-201ENST00000423641 1138 ntBASIC10.4□□□□□ -0.74
TOP2AP11388 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC10.4□□□□□ -0.74
TOP2AP11388 RPL35AP19-201ENST00000469425 329 ntBASIC10.4□□□□□ -0.74
TOP2AP11388 RPL38P3-201ENST00000484463 213 ntBASIC10.4□□□□□ -0.74
TOP2AP11388 RN7SL547P-201ENST00000490793 290 ntBASIC10.4□□□□□ -0.74
TOP2AP11388 OR4A42P-201ENST00000531397 938 ntBASIC10.4□□□□□ -0.74
TOP2AP11388 ASB8-215ENST00000540782 659 ntTSL 3 BASIC10.4□□□□□ -0.74
TOP2AP11388 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC10.4□□□□□ -0.74
TOP2AP11388 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC10.4□□□□□ -0.74
TOP2AP11388 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC10.4□□□□□ -0.74
TOP2AP11388 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
TOP2AP11388 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TOP2AP11388 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TOP2AP11388 C4BPAP1-201ENST00000415474 1893 ntBASIC10.4□□□□□ -0.74
TOP2AP11388 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC10.4□□□□□ -0.74
TOP2AP11388 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TOP2AP11388 AC025470.1-201ENST00000510053 2032 ntBASIC10.4□□□□□ -0.75
TOP2AP11388 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
TOP2AP11388 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC10.4□□□□□ -0.75
TOP2AP11388 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
TOP2AP11388 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC10.39□□□□□ -0.75
TOP2AP11388 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC10.39□□□□□ -0.75
TOP2AP11388 AC015983.1-201ENST00000441577 373 ntBASIC10.39□□□□□ -0.75
TOP2AP11388 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC10.39□□□□□ -0.75
TOP2AP11388 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC10.39□□□□□ -0.75
TOP2AP11388 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC10.39□□□□□ -0.75
TOP2AP11388 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC10.39□□□□□ -0.75
TOP2AP11388 GARSP1-201ENST00000570895 719 ntBASIC10.39□□□□□ -0.75
TOP2AP11388 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TOP2AP11388 AC024589.2-201ENST00000605642 1294 ntBASIC10.39□□□□□ -0.75
TOP2AP11388 AC145423.1-201ENST00000605712 336 ntBASIC10.39□□□□□ -0.75
TOP2AP11388 AF117829.2-201ENST00000619538 361 ntBASIC10.39□□□□□ -0.75
TOP2AP11388 AC007683.2-201ENST00000624681 714 ntBASIC10.39□□□□□ -0.75
TOP2AP11388 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC10.39□□□□□ -0.75
TOP2AP11388 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TOP2AP11388 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC10.39□□□□□ -0.75
TOP2AP11388 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
TOP2AP11388 CTAGE11P-201ENST00000451540 2353 ntBASIC10.39□□□□□ -0.75
TOP2AP11388 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC10.39□□□□□ -0.75
TOP2AP11388 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC10.39□□□□□ -0.75
TOP2AP11388 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC10.39□□□□□ -0.75
TOP2AP11388 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TOP2AP11388 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TOP2AP11388 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TOP2AP11388 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TOP2AP11388 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC10.39□□□□□ -0.75
TOP2AP11388 FBXL21-201ENST00000297158 1305 ntBASIC10.39□□□□□ -0.75
TOP2AP11388 AL031595.3-201ENST00000624919 14262 ntBASIC10.39□□□□□ -0.75
TOP2AP11388 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC10.39□□□□□ -0.75
TOP2AP11388 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC10.38□□□□□ -0.75
TOP2AP11388 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
TOP2AP11388 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC10.38□□□□□ -0.75
TOP2AP11388 CNOT7P2-201ENST00000441051 832 ntBASIC10.38□□□□□ -0.75
TOP2AP11388 RN7SL222P-201ENST00000476452 299 ntBASIC10.38□□□□□ -0.75
TOP2AP11388 AC006539.1-201ENST00000481419 501 ntBASIC10.38□□□□□ -0.75
TOP2AP11388 MIR1269B-201ENST00000580405 75 ntBASIC10.38□□□□□ -0.75
TOP2AP11388 PPATP2-201ENST00000605635 508 ntBASIC10.38□□□□□ -0.75
TOP2AP11388 MIR8080-201ENST00000622224 89 ntBASIC10.38□□□□□ -0.75
TOP2AP11388 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC10.38□□□□□ -0.75
TOP2AP11388 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TOP2AP11388 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TOP2AP11388 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TOP2AP11388 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC10.38□□□□□ -0.75
TOP2AP11388 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC10.38□□□□□ -0.75
TOP2AP11388 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TOP2AP11388 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TOP2AP11388 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TOP2AP11388 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
TOP2AP11388 AOX3P-204ENST00000491025 2107 ntBASIC10.38□□□□□ -0.75
TOP2AP11388 AC007342.5-201ENST00000571340 2142 ntBASIC10.38□□□□□ -0.75
TOP2AP11388 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TOP2AP11388 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TOP2AP11388 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC10.38□□□□□ -0.75
TOP2AP11388 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC10.38□□□□□ -0.75
TOP2AP11388 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TOP2AP11388 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TOP2AP11388 RNU4-34P-201ENST00000410431 124 ntBASIC10.38□□□□□ -0.75
TOP2AP11388 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC10.38□□□□□ -0.75
TOP2AP11388 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TOP2AP11388 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC10.38□□□□□ -0.75
TOP2AP11388 HCG18-243ENST00000602498 327 ntTSL 3 BASIC10.38□□□□□ -0.75
TOP2AP11388 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC10.38□□□□□ -0.75
TOP2AP11388 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TOP2AP11388 HLF-210ENST00000575345 3589 ntTSL 2 BASIC10.37□□□□□ -0.75
TOP2AP11388 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TOP2AP11388 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TOP2AP11388 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC10.37□□□□□ -0.75
TOP2AP11388 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC10.37□□□□□ -0.75
TOP2AP11388 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC10.37□□□□□ -0.75
TOP2AP11388 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms