Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.91□□□□□ -1.62
CD28P10747 PPIAP27-201ENST00000453800 265 ntBASIC4.91□□□□□ -1.62
CD28P10747 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.91□□□□□ -1.62
CD28P10747 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.91□□□□□ -1.62
CD28P10747 RPL5P12-201ENST00000477071 851 ntBASIC4.91□□□□□ -1.62
CD28P10747 RPL34P33-201ENST00000486062 334 ntBASIC4.91□□□□□ -1.62
CD28P10747 AL158068.1-201ENST00000506116 616 ntBASIC4.91□□□□□ -1.62
CD28P10747 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.91□□□□□ -1.62
CD28P10747 AC006499.4-201ENST00000510947 694 ntBASIC4.91□□□□□ -1.62
CD28P10747 AC106800.3-201ENST00000511389 308 ntBASIC4.91□□□□□ -1.62
CD28P10747 RN7SKP238-201ENST00000516483 249 ntBASIC4.91□□□□□ -1.62
CD28P10747 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.91□□□□□ -1.62
CD28P10747 COX6B1P4-201ENST00000519826 484 ntBASIC4.91□□□□□ -1.62
CD28P10747 NATP-201ENST00000523491 878 ntBASIC4.91□□□□□ -1.62
CD28P10747 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC4.91□□□□□ -1.62
CD28P10747 TRIM77BP-201ENST00000524985 1119 ntBASIC4.91□□□□□ -1.62
CD28P10747 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC4.91□□□□□ -1.62
CD28P10747 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.91□□□□□ -1.62
CD28P10747 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC4.91□□□□□ -1.62
CD28P10747 AC092332.1-201ENST00000563684 829 ntBASIC4.91□□□□□ -1.62
CD28P10747 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.91□□□□□ -1.62
CD28P10747 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.91□□□□□ -1.62
CD28P10747 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.91□□□□□ -1.62
CD28P10747 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CD28P10747 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.91□□□□□ -1.62
CD28P10747 AL132640.3-201ENST00000630473 177 ntBASIC4.91□□□□□ -1.62
CD28P10747 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CD28P10747 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CD28P10747 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.91□□□□□ -1.62
CD28P10747 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CD28P10747 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CD28P10747 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CD28P10747 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CD28P10747 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CD28P10747 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CD28P10747 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC4.9□□□□□ -1.62
CD28P10747 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CD28P10747 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
CD28P10747 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC4.9□□□□□ -1.62
CD28P10747 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CD28P10747 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CD28P10747 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC4.9□□□□□ -1.62
CD28P10747 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CD28P10747 AL023284.3-201ENST00000407767 334 ntBASIC4.9□□□□□ -1.63
CD28P10747 HMGN1P20-201ENST00000411849 300 ntBASIC4.9□□□□□ -1.63
CD28P10747 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD28P10747 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CD28P10747 RPS3P2-201ENST00000421346 701 ntBASIC4.9□□□□□ -1.63
CD28P10747 RPS7P14-201ENST00000426405 583 ntBASIC4.9□□□□□ -1.63
CD28P10747 AC023141.3-201ENST00000436698 278 ntBASIC4.9□□□□□ -1.63
CD28P10747 AL353662.1-201ENST00000439099 327 ntBASIC4.9□□□□□ -1.63
CD28P10747 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC4.9□□□□□ -1.63
CD28P10747 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC4.9□□□□□ -1.63
CD28P10747 HIGD1AP16-201ENST00000450986 258 ntBASIC4.9□□□□□ -1.63
CD28P10747 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.9□□□□□ -1.63
CD28P10747 RN7SL326P-201ENST00000477493 296 ntBASIC4.9□□□□□ -1.63
CD28P10747 AC068522.1-201ENST00000482895 345 ntBASIC4.9□□□□□ -1.63
CD28P10747 LSM3P4-201ENST00000502948 309 ntBASIC4.9□□□□□ -1.63
CD28P10747 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC4.9□□□□□ -1.63
CD28P10747 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.9□□□□□ -1.63
CD28P10747 IGKV1D-22-201ENST00000518953 324 ntBASIC4.9□□□□□ -1.63
CD28P10747 AC073581.1-201ENST00000519036 575 ntBASIC4.9□□□□□ -1.63
CD28P10747 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC4.9□□□□□ -1.63
CD28P10747 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.9□□□□□ -1.63
CD28P10747 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.9□□□□□ -1.63
CD28P10747 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD28P10747 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC4.9□□□□□ -1.63
CD28P10747 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.9□□□□□ -1.63
CD28P10747 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.9□□□□□ -1.63
CD28P10747 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.9□□□□□ -1.63
CD28P10747 AC108865.2-201ENST00000606881 432 ntBASIC4.9□□□□□ -1.63
CD28P10747 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.9□□□□□ -1.63
CD28P10747 AC022106.1-201ENST00000612834 766 ntBASIC4.9□□□□□ -1.63
CD28P10747 MIR6862-1-201ENST00000613016 70 ntBASIC4.9□□□□□ -1.63
CD28P10747 MIR6862-2-201ENST00000614755 70 ntBASIC4.9□□□□□ -1.63
CD28P10747 AL445647.2-201ENST00000615170 130 ntBASIC4.9□□□□□ -1.63
CD28P10747 MIR6729-201ENST00000618194 65 ntBASIC4.9□□□□□ -1.63
CD28P10747 AL512652.1-201ENST00000619006 500 ntBASIC4.9□□□□□ -1.63
CD28P10747 AC026124.2-201ENST00000621847 656 ntBASIC4.9□□□□□ -1.63
CD28P10747 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.9□□□□□ -1.63
CD28P10747 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CD28P10747 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC4.9□□□□□ -1.63
CD28P10747 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CD28P10747 AC009120.2-204ENST00000621548 2032 ntBASIC4.9□□□□□ -1.63
CD28P10747 NEK2P2-201ENST00000438441 1338 ntBASIC4.9□□□□□ -1.63
CD28P10747 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.63
CD28P10747 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
CD28P10747 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CD28P10747 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD28P10747 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
CD28P10747 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.63
CD28P10747 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD28P10747 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.9□□□□□ -1.63
CD28P10747 EEF1A1P9-201ENST00000514975 1383 ntBASIC4.9□□□□□ -1.63
CD28P10747 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD28P10747 AL133243.2-201ENST00000610331 1621 ntBASIC4.9□□□□□ -1.63
CD28P10747 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD28P10747 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CD28P10747 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD28P10747 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms