Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.46□□□□□ -1.38
RETP07949 RPL31P11-201ENST00000426558 1558 ntBASIC6.46□□□□□ -1.38
RETP07949 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.46□□□□□ -1.38
RETP07949 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.46□□□□□ -1.38
RETP07949 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.46□□□□□ -1.38
RETP07949 AC094019.1-201ENST00000434678 472 ntBASIC6.46□□□□□ -1.38
RETP07949 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.46□□□□□ -1.38
RETP07949 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.46□□□□□ -1.38
RETP07949 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.46□□□□□ -1.38
RETP07949 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.46□□□□□ -1.38
RETP07949 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.46□□□□□ -1.38
RETP07949 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RETP07949 RN7SL717P-201ENST00000478343 297 ntBASIC6.46□□□□□ -1.38
RETP07949 AC122713.1-201ENST00000518368 1015 ntBASIC6.46□□□□□ -1.38
RETP07949 AC008429.4-201ENST00000521201 182 ntBASIC6.46□□□□□ -1.38
RETP07949 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RETP07949 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.46□□□□□ -1.38
RETP07949 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.46□□□□□ -1.38
RETP07949 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.46□□□□□ -1.38
RETP07949 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.46□□□□□ -1.38
RETP07949 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 MIR6085-201ENST00000618314 110 ntBASIC6.46□□□□□ -1.38
RETP07949 LINC02495-203ENST00000636704 242 ntBASIC6.46□□□□□ -1.38
RETP07949 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RETP07949 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RETP07949 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RETP07949 CASC19-238ENST00000641523 1558 ntBASIC6.46□□□□□ -1.38
RETP07949 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.46□□□□□ -1.38
RETP07949 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
RETP07949 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.46□□□□□ -1.38
RETP07949 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.46□□□□□ -1.38
RETP07949 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.46□□□□□ -1.38
RETP07949 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.46□□□□□ -1.38
RETP07949 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.46□□□□□ -1.38
RETP07949 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RETP07949 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.45□□□□□ -1.38
RETP07949 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RETP07949 AP000432.2-201ENST00000624164 2048 ntBASIC6.45□□□□□ -1.38
RETP07949 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RETP07949 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.45□□□□□ -1.38
RETP07949 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.45□□□□□ -1.38
RETP07949 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RETP07949 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RETP07949 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RETP07949 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.45□□□□□ -1.38
RETP07949 RNA5SP242-201ENST00000364171 118 ntBASIC6.45□□□□□ -1.38
RETP07949 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RETP07949 AL157702.1-201ENST00000398764 426 ntBASIC6.45□□□□□ -1.38
RETP07949 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
RETP07949 RN7SKP278-201ENST00000410504 342 ntBASIC6.45□□□□□ -1.38
RETP07949 MTND4LP17-201ENST00000414607 293 ntBASIC6.45□□□□□ -1.38
RETP07949 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.45□□□□□ -1.38
RETP07949 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.45□□□□□ -1.38
RETP07949 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.45□□□□□ -1.38
RETP07949 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
RETP07949 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RETP07949 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.45□□□□□ -1.38
RETP07949 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RETP07949 SBDSP1-204ENST00000453858 737 ntBASIC6.45□□□□□ -1.38
RETP07949 ACA64.1-201ENST00000459171 127 ntBASIC6.45□□□□□ -1.38
RETP07949 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.45□□□□□ -1.38
RETP07949 RN7SL382P-201ENST00000482631 282 ntBASIC6.45□□□□□ -1.38
RETP07949 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.45□□□□□ -1.38
RETP07949 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RETP07949 RN7SL104P-201ENST00000498686 293 ntBASIC6.45□□□□□ -1.38
RETP07949 AC131392.1-201ENST00000506490 633 ntBASIC6.45□□□□□ -1.38
RETP07949 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.45□□□□□ -1.38
RETP07949 AC095052.1-201ENST00000509955 863 ntBASIC6.45□□□□□ -1.38
RETP07949 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.45□□□□□ -1.38
RETP07949 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.45□□□□□ -1.38
RETP07949 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.45□□□□□ -1.38
RETP07949 AC020978.7-201ENST00000575953 1187 ntBASIC6.45□□□□□ -1.38
RETP07949 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.45□□□□□ -1.38
RETP07949 OR7A8P-201ENST00000595427 913 ntBASIC6.45□□□□□ -1.38
RETP07949 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.45□□□□□ -1.38
RETP07949 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.45□□□□□ -1.38
RETP07949 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.45□□□□□ -1.38
RETP07949 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RETP07949 AC069234.4-201ENST00000621276 412 ntBASIC6.45□□□□□ -1.38
RETP07949 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.45□□□□□ -1.38
RETP07949 AL049767.1-202ENST00000637826 242 ntBASIC6.45□□□□□ -1.38
RETP07949 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.45□□□□□ -1.38
RETP07949 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
RETP07949 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.45□□□□□ -1.38
RETP07949 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RETP07949 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RETP07949 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
RETP07949 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RETP07949 AL731556.1-201ENST00000394628 3711 ntBASIC6.45□□□□□ -1.38
RETP07949 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms