Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AL391261.1-201ENST00000555712 1479 ntBASIC7.43□□□□□ -1.22
MBD4O95243 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
MBD4O95243 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.43□□□□□ -1.22
MBD4O95243 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
MBD4O95243 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
MBD4O95243 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
MBD4O95243 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.43□□□□□ -1.22
MBD4O95243 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
MBD4O95243 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
MBD4O95243 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
MBD4O95243 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
MBD4O95243 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
MBD4O95243 RNA5SP433-201ENST00000364491 114 ntBASIC7.43□□□□□ -1.22
MBD4O95243 MIR130B-202ENST00000385018 82 ntBASIC7.43□□□□□ -1.22
MBD4O95243 RN7SKP240-201ENST00000410583 375 ntBASIC7.43□□□□□ -1.22
MBD4O95243 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.43□□□□□ -1.22
MBD4O95243 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
MBD4O95243 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC7.43□□□□□ -1.22
MBD4O95243 NPM1P48-201ENST00000436002 853 ntBASIC7.43□□□□□ -1.22
MBD4O95243 AC110602.1-201ENST00000437414 318 ntBASIC7.43□□□□□ -1.22
MBD4O95243 AC097463.1-201ENST00000447288 481 ntBASIC7.43□□□□□ -1.22
MBD4O95243 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.43□□□□□ -1.22
MBD4O95243 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.43□□□□□ -1.22
MBD4O95243 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.43□□□□□ -1.22
MBD4O95243 PFN1P8-201ENST00000497012 543 ntBASIC7.43□□□□□ -1.22
MBD4O95243 AL158068.1-201ENST00000506116 616 ntBASIC7.43□□□□□ -1.22
MBD4O95243 AC090958.1-201ENST00000511122 351 ntBASIC7.43□□□□□ -1.22
MBD4O95243 RNA5SP434-201ENST00000516647 121 ntBASIC7.43□□□□□ -1.22
MBD4O95243 AC021269.1-201ENST00000526860 705 ntBASIC7.43□□□□□ -1.22
MBD4O95243 AC090115.2-201ENST00000548060 883 ntBASIC7.43□□□□□ -1.22
MBD4O95243 AC090888.3-201ENST00000558917 509 ntBASIC7.43□□□□□ -1.22
MBD4O95243 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC7.43□□□□□ -1.22
MBD4O95243 AP002345.2-201ENST00000609961 904 ntBASIC7.43□□□□□ -1.22
MBD4O95243 AC004801.6-201ENST00000616571 978 ntBASIC7.43□□□□□ -1.22
MBD4O95243 AP003400.2-201ENST00000624036 666 ntBASIC7.43□□□□□ -1.22
MBD4O95243 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.43□□□□□ -1.22
MBD4O95243 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
MBD4O95243 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
MBD4O95243 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
MBD4O95243 AC024651.2-201ENST00000562480 2098 ntBASIC7.43□□□□□ -1.22
MBD4O95243 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.43□□□□□ -1.22
MBD4O95243 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.43□□□□□ -1.22
MBD4O95243 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
MBD4O95243 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.42□□□□□ -1.22
MBD4O95243 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MBD4O95243 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MBD4O95243 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
MBD4O95243 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MBD4O95243 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MBD4O95243 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
MBD4O95243 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MBD4O95243 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
MBD4O95243 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MBD4O95243 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 AC011416.1-201ENST00000514947 1732 ntBASIC7.42□□□□□ -1.22
MBD4O95243 AC005034.3-201ENST00000604845 1747 ntBASIC7.42□□□□□ -1.22
MBD4O95243 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MBD4O95243 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
MBD4O95243 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.42□□□□□ -1.22
MBD4O95243 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MBD4O95243 SNORA21-201ENST00000362423 132 ntBASIC7.42□□□□□ -1.22
MBD4O95243 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.42□□□□□ -1.22
MBD4O95243 AC069154.1-201ENST00000432914 542 ntBASIC7.42□□□□□ -1.22
MBD4O95243 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.42□□□□□ -1.22
MBD4O95243 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.42□□□□□ -1.22
MBD4O95243 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.42□□□□□ -1.22
MBD4O95243 AC002553.3-201ENST00000453002 341 ntBASIC7.42□□□□□ -1.22
MBD4O95243 RPS27AP3-201ENST00000453803 454 ntBASIC7.42□□□□□ -1.22
MBD4O95243 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.42□□□□□ -1.22
MBD4O95243 AC112184.1-201ENST00000505179 312 ntBASIC7.42□□□□□ -1.22
MBD4O95243 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.42□□□□□ -1.22
MBD4O95243 CR383658.1-201ENST00000514609 734 ntBASIC7.42□□□□□ -1.22
MBD4O95243 RNA5SP400-201ENST00000517155 111 ntBASIC7.42□□□□□ -1.22
MBD4O95243 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.42□□□□□ -1.22
MBD4O95243 RPA2P3-201ENST00000533268 770 ntBASIC7.42□□□□□ -1.22
MBD4O95243 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.42□□□□□ -1.22
MBD4O95243 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.42□□□□□ -1.22
MBD4O95243 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.42□□□□□ -1.22
MBD4O95243 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 AC011497.2-201ENST00000600255 639 ntBASIC7.42□□□□□ -1.22
MBD4O95243 AC091193.1-201ENST00000604640 448 ntBASIC7.42□□□□□ -1.22
MBD4O95243 CYCSP1-201ENST00000604815 315 ntBASIC7.42□□□□□ -1.22
MBD4O95243 AC008555.7-201ENST00000605008 583 ntBASIC7.42□□□□□ -1.22
MBD4O95243 AP001437.1-201ENST00000608783 456 ntBASIC7.42□□□□□ -1.22
MBD4O95243 AC092681.3-201ENST00000609463 678 ntBASIC7.42□□□□□ -1.22
MBD4O95243 AC092266.1-201ENST00000610958 165 ntBASIC7.42□□□□□ -1.22
MBD4O95243 AC025262.3-201ENST00000623666 360 ntBASIC7.42□□□□□ -1.22
MBD4O95243 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
MBD4O95243 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms