Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RN7SL841P-201ENST00000470547 297 ntBASIC8.84□□□□□ -0.99
RNF40O75150 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC8.84□□□□□ -0.99
RNF40O75150 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC8.84□□□□□ -0.99
RNF40O75150 ENPP7P10-201ENST00000504828 933 ntBASIC8.84□□□□□ -0.99
RNF40O75150 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC8.84□□□□□ -0.99
RNF40O75150 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.84□□□□□ -0.99
RNF40O75150 AC017037.1-201ENST00000508460 471 ntBASIC8.84□□□□□ -0.99
RNF40O75150 AC009646.1-201ENST00000510455 318 ntBASIC8.84□□□□□ -0.99
RNF40O75150 JRKL-AS1-201ENST00000511243 426 ntTSL 2 BASIC8.84□□□□□ -0.99
RNF40O75150 UBE2Q2P10-201ENST00000514854 900 ntBASIC8.84□□□□□ -0.99
RNF40O75150 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC8.84□□□□□ -0.99
RNF40O75150 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 MPPE1P1-201ENST00000557286 1076 ntBASIC8.84□□□□□ -0.99
RNF40O75150 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC8.84□□□□□ -0.99
RNF40O75150 RN7SL664P-201ENST00000584239 305 ntBASIC8.84□□□□□ -0.99
RNF40O75150 APOC2-202ENST00000585786 880 ntTSL 2 BASIC8.84□□□□□ -0.99
RNF40O75150 TBX18-AS1-208ENST00000591225 762 ntTSL 5 BASIC8.84□□□□□ -0.99
RNF40O75150 APOC2-204ENST00000591597 447 ntTSL 5 BASIC8.84□□□□□ -0.99
RNF40O75150 AL590282.1-201ENST00000610379 1136 ntBASIC8.84□□□□□ -0.99
RNF40O75150 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC8.84□□□□□ -0.99
RNF40O75150 Metazoa_SRP.44-201ENST00000615037 294 ntBASIC8.84□□□□□ -0.99
RNF40O75150 MIR6829-201ENST00000620375 67 ntBASIC8.84□□□□□ -0.99
RNF40O75150 AL356095.2-201ENST00000624025 457 ntBASIC8.84□□□□□ -0.99
RNF40O75150 AL355480.4-201ENST00000626823 69 ntBASIC8.84□□□□□ -0.99
RNF40O75150 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC8.84□□□□□ -0.99
RNF40O75150 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
RNF40O75150 MTCO1P11-201ENST00000429111 1528 ntBASIC8.84□□□□□ -0.99
RNF40O75150 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.84□□□□□ -0.99
RNF40O75150 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC8.84□□□□□ -0.99
RNF40O75150 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.84□□□□□ -0.99
RNF40O75150 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.84□□□□□ -0.99
RNF40O75150 AC093616.1-201ENST00000427434 2095 ntBASIC8.84□□□□□ -0.99
RNF40O75150 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC8.84□□□□□ -0.99
RNF40O75150 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.84□□□□□ -1
RNF40O75150 AL031123.2-201ENST00000563225 3325 ntBASIC8.83□□□□□ -1
RNF40O75150 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.83□□□□□ -1
RNF40O75150 AC145138.1-201ENST00000512908 2851 ntBASIC8.83□□□□□ -1
RNF40O75150 AL023806.3-201ENST00000638502 2704 ntBASIC8.83□□□□□ -1
RNF40O75150 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC8.83□□□□□ -1
RNF40O75150 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC8.83□□□□□ -1
RNF40O75150 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC8.83□□□□□ -1
RNF40O75150 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.83□□□□□ -1
RNF40O75150 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.83□□□□□ -1
RNF40O75150 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.83□□□□□ -1
RNF40O75150 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 RNU6-621P-201ENST00000364752 109 ntBASIC8.83□□□□□ -1
RNF40O75150 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.83□□□□□ -1
RNF40O75150 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 AC084880.1-201ENST00000392530 545 ntBASIC8.83□□□□□ -1
RNF40O75150 FTH1P3-201ENST00000394290 584 ntBASIC8.83□□□□□ -1
RNF40O75150 U3.33-201ENST00000408117 204 ntBASIC8.83□□□□□ -1
RNF40O75150 AL356968.2-201ENST00000412769 1257 ntBASIC8.83□□□□□ -1
RNF40O75150 AC114760.1-201ENST00000420310 652 ntBASIC8.83□□□□□ -1
RNF40O75150 AL355863.1-201ENST00000424331 293 ntBASIC8.83□□□□□ -1
RNF40O75150 CYP4F26P-202ENST00000433357 852 ntTSL 5 BASIC8.83□□□□□ -1
RNF40O75150 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC8.83□□□□□ -1
RNF40O75150 AL158214.1-201ENST00000444423 404 ntBASIC8.83□□□□□ -1
RNF40O75150 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC8.83□□□□□ -1
RNF40O75150 VDAC2P4-201ENST00000452925 711 ntBASIC8.83□□□□□ -1
RNF40O75150 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 AC025062.1-201ENST00000465163 644 ntBASIC8.83□□□□□ -1
RNF40O75150 AC092757.1-201ENST00000467293 467 ntBASIC8.83□□□□□ -1
RNF40O75150 AC104164.4-201ENST00000483456 493 ntBASIC8.83□□□□□ -1
RNF40O75150 HNRNPA1P20-201ENST00000484852 955 ntBASIC8.83□□□□□ -1
RNF40O75150 RN7SKP197-201ENST00000517077 297 ntBASIC8.83□□□□□ -1
RNF40O75150 IGLVI-68-201ENST00000519525 345 ntBASIC8.83□□□□□ -1
RNF40O75150 IGKV2D-14-201ENST00000522473 355 ntBASIC8.83□□□□□ -1
RNF40O75150 AP001893.2-201ENST00000526949 202 ntBASIC8.83□□□□□ -1
RNF40O75150 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.83□□□□□ -1
RNF40O75150 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC8.83□□□□□ -1
RNF40O75150 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC8.83□□□□□ -1
RNF40O75150 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.83□□□□□ -1
RNF40O75150 RPL27-207ENST00000590864 569 ntTSL 2 BASIC8.83□□□□□ -1
RNF40O75150 AL139286.1-201ENST00000604465 483 ntBASIC8.83□□□□□ -1
RNF40O75150 RN7SL760P-201ENST00000607344 270 ntBASIC8.83□□□□□ -1
RNF40O75150 AC023158.2-201ENST00000614876 543 ntBASIC8.83□□□□□ -1
RNF40O75150 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC8.83□□□□□ -1
RNF40O75150 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC8.83□□□□□ -1
RNF40O75150 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
RNF40O75150 AC119619.1-201ENST00000619728 112 ntBASIC8.83□□□□□ -1
RNF40O75150 AC073862.4-201ENST00000622982 854 ntBASIC8.83□□□□□ -1
RNF40O75150 AC048380.3-201ENST00000623145 796 ntBASIC8.83□□□□□ -1
RNF40O75150 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC8.83□□□□□ -1
RNF40O75150 HLA-B-258ENST00000640615 240 ntBASIC8.83□□□□□ -1
RNF40O75150 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
RNF40O75150 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms