Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.65□□□□□ -1.34
O00370 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
O00370 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
O00370 RNU11-6P-201ENST00000391127 133 ntBASIC6.65□□□□□ -1.34
O00370 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.65□□□□□ -1.34
O00370 HMGA1P8-201ENST00000414130 321 ntBASIC6.65□□□□□ -1.34
O00370 RPS26P38-201ENST00000414476 348 ntBASIC6.65□□□□□ -1.34
O00370 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.65□□□□□ -1.34
O00370 AC021876.1-201ENST00000425959 359 ntBASIC6.65□□□□□ -1.34
O00370 BX679664.2-201ENST00000439282 283 ntBASIC6.65□□□□□ -1.34
O00370 AL022237.1-201ENST00000446663 358 ntBASIC6.65□□□□□ -1.34
O00370 RN7SL552P-201ENST00000462094 276 ntBASIC6.65□□□□□ -1.34
O00370 ZNF519P4-201ENST00000514008 125 ntBASIC6.65□□□□□ -1.34
O00370 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.65□□□□□ -1.34
O00370 OR4A41P-201ENST00000533053 928 ntBASIC6.65□□□□□ -1.34
O00370 OR4A40P-201ENST00000533878 948 ntBASIC6.65□□□□□ -1.34
O00370 AP001858.2-201ENST00000536213 601 ntBASIC6.65□□□□□ -1.34
O00370 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.65□□□□□ -1.34
O00370 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.65□□□□□ -1.34
O00370 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.65□□□□□ -1.34
O00370 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.65□□□□□ -1.34
O00370 AC121758.1-202ENST00000556917 658 ntBASIC6.65□□□□□ -1.34
O00370 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.65□□□□□ -1.34
O00370 AL591167.1-201ENST00000607321 456 ntBASIC6.65□□□□□ -1.34
O00370 MIR6889-201ENST00000613185 59 ntBASIC6.65□□□□□ -1.34
O00370 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.65□□□□□ -1.34
O00370 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.65□□□□□ -1.34
O00370 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
O00370 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
O00370 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
O00370 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.65□□□□□ -1.35
O00370 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
O00370 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
O00370 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
O00370 ZNF402P-201ENST00000404435 3100 ntBASIC6.65□□□□□ -1.35
O00370 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
O00370 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
O00370 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
O00370 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
O00370 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
O00370 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
O00370 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
O00370 MIR433-201ENST00000384837 93 ntBASIC6.64□□□□□ -1.35
O00370 MIR188-201ENST00000385034 86 ntBASIC6.64□□□□□ -1.35
O00370 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.64□□□□□ -1.35
O00370 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
O00370 AL139805.1-201ENST00000407837 289 ntBASIC6.64□□□□□ -1.35
O00370 AC099782.1-201ENST00000425889 474 ntBASIC6.64□□□□□ -1.35
O00370 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.64□□□□□ -1.35
O00370 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.64□□□□□ -1.35
O00370 AC103563.5-201ENST00000455643 364 ntBASIC6.64□□□□□ -1.35
O00370 RANP2-201ENST00000456833 229 ntBASIC6.64□□□□□ -1.35
O00370 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.64□□□□□ -1.35
O00370 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.64□□□□□ -1.35
O00370 AC036111.2-201ENST00000533247 901 ntBASIC6.64□□□□□ -1.35
O00370 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.64□□□□□ -1.35
O00370 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.64□□□□□ -1.35
O00370 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.64□□□□□ -1.35
O00370 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.64□□□□□ -1.35
O00370 AC007494.1-201ENST00000562293 760 ntBASIC6.64□□□□□ -1.35
O00370 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
O00370 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.64□□□□□ -1.35
O00370 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.64□□□□□ -1.35
O00370 DYNLL1P1-201ENST00000595442 269 ntBASIC6.64□□□□□ -1.35
O00370 RPSAP75-201ENST00000605848 301 ntBASIC6.64□□□□□ -1.35
O00370 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.64□□□□□ -1.35
O00370 AL135999.3-201ENST00000610501 812 ntBASIC6.64□□□□□ -1.35
O00370 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.64□□□□□ -1.35
O00370 AP001153.1-201ENST00000641024 338 ntBASIC6.64□□□□□ -1.35
O00370 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
O00370 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
O00370 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
O00370 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.64□□□□□ -1.35
O00370 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.64□□□□□ -1.35
O00370 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
O00370 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
O00370 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.64□□□□□ -1.35
O00370 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
O00370 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.63□□□□□ -1.35
O00370 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
O00370 AC092724.1-201ENST00000624623 3397 ntBASIC6.63□□□□□ -1.35
O00370 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
O00370 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
O00370 RNU1-49P-201ENST00000363468 159 ntBASIC6.63□□□□□ -1.35
O00370 RN7SKP171-201ENST00000364417 303 ntBASIC6.63□□□□□ -1.35
O00370 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
O00370 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
O00370 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.63□□□□□ -1.35
O00370 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.63□□□□□ -1.35
O00370 AC010086.1-201ENST00000437359 1052 ntBASIC6.63□□□□□ -1.35
O00370 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.63□□□□□ -1.35
O00370 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.63□□□□□ -1.35
O00370 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.63□□□□□ -1.35
O00370 AC005165.2-201ENST00000466070 380 ntBASIC6.63□□□□□ -1.35
O00370 RN7SL221P-201ENST00000466190 281 ntBASIC6.63□□□□□ -1.35
O00370 OR7E22P-201ENST00000478335 1035 ntBASIC6.63□□□□□ -1.35
O00370 AC005017.1-201ENST00000482002 490 ntBASIC6.63□□□□□ -1.35
O00370 RPS27P20-201ENST00000492051 246 ntBASIC6.63□□□□□ -1.35
O00370 AL117692.1-201ENST00000494283 713 ntBASIC6.63□□□□□ -1.35
O00370 GTF2IP11-201ENST00000526931 420 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms