Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AL663074.2-201ENST00000440621 479 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 PRKAR1AP1-201ENST00000441422 1162 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC239800.1-201ENST00000442049 719 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 RSU1P1-201ENST00000453416 441 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC124945.1-201ENST00000485133 188 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC012123.2-201ENST00000485809 248 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 SCARNA5-201ENST00000516201 276 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 RNA5SP318-201ENST00000516352 92 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 TPM3P3-201ENST00000521343 354 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC010487.1-201ENST00000594408 1172 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 COX6CP16-201ENST00000603667 216 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AL139041.1-201ENST00000605480 610 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AL136097.3-201ENST00000611097 505 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC006328.2-201ENST00000623198 397 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC012005.2-201ENST00000624333 397 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC073488.9-201ENST00000631601 754 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC026108.1-201ENST00000635444 547 ntBASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RBFOX3A6NFN3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
RBFOX3A6NFN3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.64
RBFOX3A6NFN3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.84□□□□□ -1.64
RBFOX3A6NFN3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RBFOX3A6NFN3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
RBFOX3A6NFN3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.84□□□□□ -1.64
RBFOX3A6NFN3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RBFOX3A6NFN3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
RBFOX3A6NFN3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RBFOX3A6NFN3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
RBFOX3A6NFN3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RBFOX3A6NFN3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.84□□□□□ -1.64
RBFOX3A6NFN3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 HSP90AA2P-201ENST00000530115 2196 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 RN7SKP185-201ENST00000362813 326 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 RNA5SP382-201ENST00000363355 112 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC087752.1-201ENST00000391360 558 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AL391419.1-201ENST00000398901 1275 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AL117344.1-201ENST00000407196 616 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AL358178.1-201ENST00000407698 397 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 RNA5SP280-201ENST00000411230 115 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC134879.1-201ENST00000426062 394 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 GAPDHP75-201ENST00000433910 943 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 RPSAP48-201ENST00000466509 889 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC008620.1-201ENST00000468453 592 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC010343.2-201ENST00000510162 224 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC084824.2-201ENST00000548906 345 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC009962.1-201ENST00000567327 3813 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC091304.5-201ENST00000568969 158 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AP006587.6-201ENST00000582128 1091 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 EXOSC3P2-201ENST00000594464 497 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC092032.1-201ENST00000603090 165 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms