Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 SNX18P3-202ENST00000565670 1750 ntBASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 SNORA77.2-201ENST00000408571 112 ntBASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 RN7SKP144-201ENST00000411108 279 ntBASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 GAPDHP19-201ENST00000431768 1005 ntBASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 RPS3AP38-201ENST00000435889 763 ntBASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 AC013403.1-201ENST00000436954 263 ntBASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 ARMC4P1-201ENST00000438905 707 ntBASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 AC245291.3-201ENST00000443400 292 ntBASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 RN7SL393P-201ENST00000463588 296 ntBASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 AC117500.1-201ENST00000497352 755 ntBASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 AC016583.1-201ENST00000624221 2431 ntBASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRAV27A0A087WT01 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 AC010086.1-201ENST00000437359 1052 ntBASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 OR3D1P-201ENST00000438288 955 ntBASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 RPL23AP60-201ENST00000450011 454 ntBASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 NATP-201ENST00000523491 878 ntBASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 RPSAP75-201ENST00000605848 301 ntBASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 MAPK10-350ENST00000641777 965 ntBASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAV27A0A087WT01 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 AC119674.1-202ENST00000641333 1860 ntBASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 AC020656.2-201ENST00000613291 5309 ntBASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 SNORD1C-201ENST00000363315 78 ntBASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 PSMD10P2-201ENST00000432890 672 ntBASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.48□□□□□ -1.53
TRAV27A0A087WT01 RPS19P6-201ENST00000441327 433 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms