Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNA5SP140-201ENST00000364524 92 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 RBBP4P5-201ENST00000398583 1266 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AL359694.1-201ENST00000403247 604 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 RPL12P23-201ENST00000405880 490 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 RN7SKP296-201ENST00000411185 341 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 MTND4LP13-201ENST00000425022 298 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 GAPDHP19-201ENST00000431768 1005 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 RPL26P30-201ENST00000453533 435 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 RNU6-1102P-201ENST00000516149 96 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AP000662.1-201ENST00000530952 487 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AL445383.1-201ENST00000554689 874 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 ANP32BP1-202ENST00000568553 737 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC138207.8-204ENST00000579588 527 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 MIR4732-201ENST00000581873 76 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 MIR212-201ENST00000586026 110 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC005776.1-201ENST00000603164 290 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 MTATP6P2-201ENST00000603319 678 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC012175.1-201ENST00000603755 531 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AL445647.2-201ENST00000615170 130 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 MIR1264-201ENST00000616374 69 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AL163051.2-201ENST00000618976 735 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC097460.3-201ENST00000623099 442 ntBASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC062029.1-202ENST00000606164 3651 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 OR2M1P-201ENST00000318104 951 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 OR11H13P-201ENST00000359695 979 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 YWHAZP4-201ENST00000392459 708 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 RPL26P37-201ENST00000411983 438 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC093084.1-201ENST00000424233 687 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC128677.1-201ENST00000436016 442 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 MTCYBP29-201ENST00000436327 1006 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC092601.1-201ENST00000444526 383 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 RPS18P1-201ENST00000447840 458 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC099670.1-201ENST00000455141 783 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC044810.1-201ENST00000480271 711 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 MTCO2P9-201ENST00000503214 694 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AL390198.2-201ENST00000510553 222 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC011921.2-201ENST00000589465 152 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms