Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AC007406.5-201ENST00000570140 3170 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 RN7SKP15-201ENST00000364742 309 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 RN7SKP269-201ENST00000365545 319 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 DHFRP2-201ENST00000414224 547 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AK3P5-201ENST00000432033 519 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AL136455.1-201ENST00000441083 1240 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AC010240.2-201ENST00000445363 1205 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 RBMY2AP-201ENST00000445405 1157 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 CT45A11P-201ENST00000448043 1134 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 RBMY2CP-201ENST00000448575 1157 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 RBMY2DP-202ENST00000448881 1157 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 NPM1P27-201ENST00000502784 830 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 OR7E158P-201ENST00000524483 910 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AC090115.2-201ENST00000548060 883 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 MIR4301-201ENST00000577203 66 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AC011497.2-201ENST00000600255 639 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AC073046.2-201ENST00000604756 527 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AL136097.3-201ENST00000611097 505 ntBASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPIPA1Q9UND3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NPIPA1Q9UND3 AC074141.1-201ENST00000588129 2995 ntBASIC5.84□□□□□ -1.48
NPIPA1Q9UND3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
NPIPA1Q9UND3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
NPIPA1Q9UND3 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NPIPA1Q9UND3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.84□□□□□ -1.48
NPIPA1Q9UND3 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
NPIPA1Q9UND3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AC008957.3-201ENST00000624112 2242 ntBASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 RPL7P58-201ENST00000402913 758 ntBASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AL139805.1-201ENST00000407837 289 ntBASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 OR52I1-201ENST00000450052 1050 ntBASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 RPL23AP64-201ENST00000469465 435 ntBASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AC092824.1-201ENST00000483524 576 ntBASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AC090568.1-201ENST00000509499 856 ntBASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 RNA5SP206-201ENST00000516703 121 ntBASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 TPRX1P1-201ENST00000557620 319 ntBASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 AL138895.2-201ENST00000603019 178 ntBASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.83□□□□□ -1.48
NPIPA1Q9UND3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms