Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 MTCO1P25-201ENST00000414449 1799 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 OR51C1P-202ENST00000641159 1444 ntBASIC6.67□□□□□ -1.34
DKK3Q9UBP4 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.67□□□□□ -1.34
DKK3Q9UBP4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AL662795.2-201ENST00000624252 3706 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC007485.2-201ENST00000623493 1667 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 U3.52-201ENST00000384034 216 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 OR1F12-201ENST00000402365 945 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 RN7SKP188-201ENST00000410789 317 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 MTND4P11-201ENST00000417020 1058 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 MRPS21P5-201ENST00000417885 231 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 OR6R1P-201ENST00000431838 940 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AL645939.3-201ENST00000435408 225 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC013410.1-201ENST00000436223 1232 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC015908.1-201ENST00000478739 476 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 RN7SL413P-201ENST00000482700 297 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 RN7SL561P-201ENST00000488553 281 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 GOLGA5P1-201ENST00000507317 980 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC106800.2-201ENST00000514009 1103 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC021733.2-201ENST00000518830 497 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 RPL41P2-201ENST00000544920 409 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 LINC00557-201ENST00000563184 1279 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC107993.1-201ENST00000591343 684 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AL049840.5-201ENST00000602827 552 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 SNORD96A-201ENST00000606577 79 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AL136097.3-201ENST00000611097 505 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 MIR6778-201ENST00000617912 73 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AL354718.1-201ENST00000619764 589 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AL136520.1-201ENST00000600311 1322 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 OLMALINC-203ENST00000641087 3779 ntBASIC6.66□□□□□ -1.34
DKK3Q9UBP4 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
DKK3Q9UBP4 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 RN7SKP199-201ENST00000410325 305 ntBASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AL354692.1-201ENST00000423044 315 ntBASIC6.65□□□□□ -1.34
DKK3Q9UBP4 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms