Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 Y_RNA.62-201ENST00000362840 99 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 OR6K3-202ENST00000368146 996 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC008171.1-201ENST00000395058 200 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 RNU2-72P-201ENST00000411175 163 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC066692.1-201ENST00000421721 457 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC097721.1-201ENST00000427150 1253 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 PPIAP10-201ENST00000438675 458 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 ZNF736P1Y-201ENST00000440402 1276 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 MORF4-201ENST00000447135 971 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 OR52Y1P-201ENST00000452418 828 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 LSM3P4-201ENST00000502948 309 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 RNA5SP434-201ENST00000516647 121 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 Y_RNA.710-201ENST00000516975 110 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 NANOGNBP2-201ENST00000544753 553 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC011270.1-201ENST00000558606 583 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC009120.3-201ENST00000563335 499 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC092332.1-201ENST00000563684 829 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC008507.3-201ENST00000585753 472 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC096586.2-201ENST00000610260 441 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC024884.1-201ENST00000620583 399 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 AL391262.2-201ENST00000622466 494 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC022400.9-201ENST00000623633 273 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 NBPF8-201ENST00000583271 5330 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 AC004014.2-201ENST00000623718 5122 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL20A1Q9P218 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL20A1Q9P218 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL20A1Q9P218 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC105235.1-201ENST00000623208 1816 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL20A1Q9P218 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL20A1Q9P218 SNORA21-201ENST00000362423 132 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 LCN1P2-201ENST00000372030 223 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 RN7SKP144-201ENST00000411108 279 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AL389925.1-201ENST00000432257 728 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 Z85994.2-201ENST00000434327 452 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 OR6C72P-201ENST00000451403 892 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 PPIAP27-201ENST00000453800 265 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC093827.1-201ENST00000480094 861 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC112184.1-201ENST00000505179 312 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 CR383658.1-201ENST00000514609 734 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 TRIM77BP-201ENST00000524985 1119 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC090286.3-201ENST00000573133 187 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC027229.1-201ENST00000583887 253 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AL138895.2-201ENST00000603019 178 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC092474.3-201ENST00000603022 568 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC092574.1-201ENST00000609771 420 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 AL445649.1-201ENST00000615941 691 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC073862.4-201ENST00000622982 854 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC012254.5-201ENST00000623573 478 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms