Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC112492.2-201ENST00000432774 1030 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 EMC3-AS1-205ENST00000438698 534 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 SOCS5P1-201ENST00000440415 949 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 RPL23AP60-201ENST00000450011 454 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 CR383656.1-201ENST00000484916 377 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 GM2AP2-201ENST00000491764 562 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 TOMM22P4-201ENST00000511318 336 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC134698.1-201ENST00000511619 643 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 IGKV2-19-201ENST00000518132 283 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 OR7E19P-202ENST00000589942 844 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC022106.1-201ENST00000612834 766 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AL031658.2-201ENST00000616850 651 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 MAPK10-350ENST00000641777 965 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC140479.2-201ENST00000421567 3130 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AL161756.3-201ENST00000641216 2071 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 TRGV5P-201ENST00000419915 354 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AL645939.3-201ENST00000435408 225 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 COX4I1P2-201ENST00000447446 547 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 REG1CP-206ENST00000447469 496 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC124945.1-201ENST00000485133 188 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 TRBV5-2-201ENST00000489095 273 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC093816.1-201ENST00000515076 913 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 RNA5SP206-201ENST00000516703 121 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 Y_RNA.710-201ENST00000516975 110 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC006120.1-201ENST00000579375 546 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC026898.1-201ENST00000586404 571 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC141002.1-201ENST00000607025 279 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC012511.1-201ENST00000608140 449 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AL136097.3-201ENST00000611097 505 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 Z95114.1-201ENST00000624264 14574 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC016583.1-201ENST00000624221 2431 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 AC079248.1-201ENST00000427568 1546 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.78□□□□□ -1.48
VAPAQ9P0L0 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.78□□□□□ -1.48
VAPAQ9P0L0 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms