Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AL096711.1-201ENST00000404780 554 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 RN7SKP148-201ENST00000410179 275 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 XKRYP4-201ENST00000414395 483 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 MTCYBP7-201ENST00000419540 1134 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 PNRC2P1-201ENST00000423940 420 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 OSTCP5-201ENST00000425293 453 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC018804.1-201ENST00000430381 618 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 CHCHD4P5-201ENST00000436684 427 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 MYL6P3-201ENST00000436904 432 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 RPS10P14-201ENST00000440748 502 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 DEFA11P-201ENST00000446470 261 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 Z73417.1-201ENST00000447373 778 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 XKRYP5-201ENST00000449659 483 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AL354714.5-201ENST00000450131 590 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC010878.1-201ENST00000456500 1047 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 PSMA6P2-201ENST00000457574 686 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AP000805.1-201ENST00000471604 784 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC131233.1-201ENST00000479200 955 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 RPL12P7-201ENST00000493832 494 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 RFPL4AP3-201ENST00000515267 345 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 OR7E154P-201ENST00000525174 932 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 BTG1P1-201ENST00000540396 508 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AP003717.3-201ENST00000544832 1180 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AL132640.1-201ENST00000559594 619 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC244034.2-201ENST00000562504 509 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 SIGLEC31P-201ENST00000594237 551 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC245036.5-201ENST00000596330 847 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 PTCHD3P1-201ENST00000612350 537 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AL355493.4-201ENST00000618530 292 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC011471.4-201ENST00000638271 216 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 NEK2P4-201ENST00000425793 1329 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 SNORD56.4-201ENST00000363883 71 ntBASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 GAPDHP15-201ENST00000398586 975 ntBASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 RN7SKP232-201ENST00000410170 290 ntBASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 CBX1P3-201ENST00000413296 527 ntBASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 DHFRP2-201ENST00000414224 547 ntBASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 AC092648.1-201ENST00000425870 423 ntBASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 BX119917.1-201ENST00000432517 502 ntBASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 MTCYBP29-201ENST00000436327 1006 ntBASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 AL157827.1-201ENST00000447622 132 ntBASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 SLAMF6P1-201ENST00000451067 602 ntBASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 MTND4LP2-201ENST00000502312 285 ntBASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 AC026414.1-201ENST00000504046 698 ntBASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM39Q9HCM9 AC017007.1-201ENST00000511960 415 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms