Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 OSTCP4-201ENST00000424397 449 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 RPL12P16-201ENST00000431098 498 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 DNAJC19P5-201ENST00000443295 316 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 CXCR2P1-202ENST00000443392 1074 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 AC063955.1-201ENST00000462872 685 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 RN7SL790P-201ENST00000474043 298 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 RPL12P31-201ENST00000478433 450 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 RNA5SP75-201ENST00000516841 111 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 NPM1P42-201ENST00000560329 862 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 AC008555.7-201ENST00000605008 583 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 AL390877.1-201ENST00000605704 214 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 AC141002.1-201ENST00000607025 279 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 MIR6503-201ENST00000622884 86 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 AC079248.1-201ENST00000427568 1546 ntBASIC5.13□□□□□ -1.59
HDHD3Q9BSH5 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 NPM1P23-201ENST00000440193 849 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AL512593.1-201ENST00000444758 779 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 NPM1P9-201ENST00000453156 844 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 EIF3LP2-201ENST00000457262 807 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 RN7SL39P-201ENST00000462264 297 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 TRBV5-2-201ENST00000489095 273 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC015524.1-201ENST00000491585 472 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 TOMM22P4-201ENST00000511318 336 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC135983.3-201ENST00000528049 1226 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC037479.1-201ENST00000558361 625 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 MIR4732-201ENST00000581873 76 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AL589765.6-201ENST00000601909 549 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC036176.3-201ENST00000602456 418 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AL078624.2-201ENST00000605063 554 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 uc_338.26-201ENST00000612659 160 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC068213.1-201ENST00000625124 226 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 EIF3EP1-201ENST00000433978 1316 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms