Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SSX3Q99909 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SSX3Q99909 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX3Q99909 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 CYCSP17-201ENST00000407870 315 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 RNA5SP155-201ENST00000411154 129 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX3Q99909 SNRPBP1-201ENST00000443634 282 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX3Q99909 SNRPCP11-201ENST00000492453 205 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX3Q99909 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX3Q99909 SNORA70.11-201ENST00000515987 138 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 SNORA70.13-201ENST00000516116 138 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.5□□□□□ -1.53
SSX3Q99909 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX3Q99909 OR4A21P-201ENST00000532759 944 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.5□□□□□ -1.53
SSX3Q99909 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.5□□□□□ -1.53
SSX3Q99909 OR4C49P-201ENST00000563891 900 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX3Q99909 AC087575.1-201ENST00000585087 229 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 RPL7AP69-201ENST00000595306 806 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 AC011497.2-201ENST00000600255 639 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 AC002069.2-201ENST00000603580 883 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX3Q99909 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX3Q99909 AC099654.6-201ENST00000636487 512 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 AC007603.3-201ENST00000636915 979 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.5□□□□□ -1.53
SSX3Q99909 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX3Q99909 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 AC068870.3-201ENST00000625077 2536 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
SSX3Q99909 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SSX3Q99909 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SSX3Q99909 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 THAP12P8-201ENST00000447914 2115 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 HSPD1P7-201ENST00000447985 1686 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 AC020633.1-201ENST00000468439 2247 ntBASIC5.5□□□□□ -1.53
SSX3Q99909 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
SSX3Q99909 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX3Q99909 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX3Q99909 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX3Q99909 AC006484.1-201ENST00000435086 1884 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX3Q99909 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SSX3Q99909 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.49□□□□□ -1.53
SSX3Q99909 RBPJP6-201ENST00000411556 1431 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.49□□□□□ -1.53
SSX3Q99909 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.49□□□□□ -1.53
SSX3Q99909 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SSX3Q99909 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SSX3Q99909 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 AL033519.1-201ENST00000407266 307 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 RNU2-22P-201ENST00000411266 212 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 CASKP1-201ENST00000412870 582 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX3Q99909 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX3Q99909 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX3Q99909 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.49□□□□□ -1.53
SSX3Q99909 SPATA20P1-201ENST00000423089 438 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX3Q99909 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX3Q99909 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
SSX3Q99909 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX3Q99909 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.49□□□□□ -1.53
SSX3Q99909 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.49□□□□□ -1.53
SSX3Q99909 MEF2AP1-201ENST00000454867 863 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX3Q99909 AC108751.3-201ENST00000461814 1020 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 AP003385.3-201ENST00000472498 287 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.49□□□□□ -1.53
SSX3Q99909 RN7SL187P-201ENST00000495587 303 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.49□□□□□ -1.53
SSX3Q99909 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX3Q99909 AC087752.2-201ENST00000521219 281 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX3Q99909 AC084851.2-201ENST00000530377 364 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 SETP17-201ENST00000534163 817 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX3Q99909 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms