Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC126323.4-201ENST00000566935 234 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 MIR4312-201ENST00000579909 76 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 MIR4433B-201ENST00000581329 102 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC100832.2-201ENST00000582080 776 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC090616.1-201ENST00000583895 447 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC009303.3-201ENST00000591103 736 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC245100.2-201ENST00000454544 1679 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 GUCY1B2-204ENST00000531898 1979 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
VPS33AQ96AX1 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
VPS33AQ96AX1 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
VPS33AQ96AX1 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
VPS33AQ96AX1 MSL3P1-202ENST00000440028 1468 ntBASIC6.09□□□□□ -1.44
VPS33AQ96AX1 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
VPS33AQ96AX1 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 RNU6-697P-201ENST00000363348 107 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 RNA5SP302-201ENST00000364896 100 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 FDPSP6-201ENST00000425091 512 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 CHCHD4P5-201ENST00000436684 427 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 RPL6P24-201ENST00000445338 864 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 UBBP5-201ENST00000446970 266 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AL121578.2-201ENST00000448797 447 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AC106800.3-201ENST00000511389 308 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 RNU6-551P-201ENST00000516661 103 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AC008126.1-201ENST00000549019 480 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AC009120.3-201ENST00000563335 499 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AC125494.2-201ENST00000602431 657 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AC024085.1-201ENST00000604299 432 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AC019257.2-201ENST00000605539 497 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AL021368.3-201ENST00000607119 578 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AC010998.3-201ENST00000613871 631 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AC009283.1-201ENST00000615852 645 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 AL161912.4-201ENST00000623889 2468 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 GTF2IP4-201ENST00000453092 2054 ntBASIC6.08□□□□□ -1.44
VPS33AQ96AX1 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS33AQ96AX1 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AC010132.4-201ENST00000569883 1368 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 RNU4-23P-201ENST00000362839 140 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AC074375.1-201ENST00000372993 192 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 U3.52-201ENST00000384034 216 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms