Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL390879.1-201ENST00000439143 386 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 PA2G4P1-201ENST00000442248 1197 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AL133351.3-201ENST00000454998 193 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AC008945.1-201ENST00000505144 499 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 Y_RNA.710-201ENST00000516975 110 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 MIR132-201ENST00000591554 101 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AL591167.1-201ENST00000607321 456 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 MIR6885-201ENST00000612241 66 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AC089999.3-201ENST00000622440 577 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AL049634.1-201ENST00000453770 1720 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AC005725.1-201ENST00000577346 2607 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 AC063923.1-201ENST00000478982 1619 ntBASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDKL3Q8IVW4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 AC114876.1-201ENST00000490962 1366 ntBASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 AL121768.1-201ENST00000613917 2544 ntBASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 SNORA64.3-201ENST00000365647 134 ntBASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 RPL7P58-201ENST00000402913 758 ntBASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 H3F3BP1-201ENST00000440551 403 ntBASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 RPS18P1-201ENST00000447840 458 ntBASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 RN7SL66P-201ENST00000582099 264 ntBASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 AL352984.2-201ENST00000611153 546 ntBASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDKL3Q8IVW4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CDKL3Q8IVW4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
CDKL3Q8IVW4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.34□□□□□ -1.4
CDKL3Q8IVW4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.34□□□□□ -1.4
CDKL3Q8IVW4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AC006600.2-201ENST00000624834 2506 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AL133243.2-201ENST00000610331 1621 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 RNA5SP77-201ENST00000365394 120 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AL157702.1-201ENST00000398764 426 ntBASIC6.33□□□□□ -1.4
CDKL3Q8IVW4 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms