Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC147055.4-201ENST00000504399 745 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 WBP1LP4-201ENST00000505043 344 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 HSPE1P23-201ENST00000509838 286 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 UGT2A3P7-201ENST00000510485 734 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC113191.1-201ENST00000517759 403 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AP000662.1-201ENST00000530952 487 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 OR4A21P-201ENST00000532759 944 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 PHBP2-201ENST00000532859 806 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC142086.3-201ENST00000563896 802 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 MTCO1P40-201ENST00000574371 625 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC008507.1-201ENST00000587506 734 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC083899.3-201ENST00000603413 594 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC023310.4-201ENST00000613130 650 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AC097641.3-201ENST00000613523 464 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.25□□□□□ -1.09
RNF135Q8IUD6 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RNF135Q8IUD6 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 PDZK1P1-202ENST00000425209 1350 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC073324.1-201ENST00000425993 1435 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC061975.5-201ENST00000584928 1441 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 MELK-211ENST00000545008 2236 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 SNORA75-201ENST00000384158 137 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 SNORD15A-201ENST00000384214 148 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 RN7SKP26-201ENST00000410247 293 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 TPMTP3-201ENST00000411928 735 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 FNDC3CP-201ENST00000420795 1155 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 RPL7P30-201ENST00000420888 709 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 KCTD9P1-201ENST00000430462 1167 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC122718.1-201ENST00000439448 744 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC023512.1-201ENST00000444513 499 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 FGF7P6-202ENST00000451282 293 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AL358876.1-201ENST00000453364 1075 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 FAM133DP-201ENST00000464802 691 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC008620.1-201ENST00000468453 592 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC116337.2-201ENST00000477662 156 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 PRDX4P1-201ENST00000507189 574 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 HMGB3P13-201ENST00000511263 607 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 MTCYBP44-201ENST00000514835 823 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 PRELID3BP4-201ENST00000515476 571 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms