Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC004890.1-201ENST00000461005 181 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AC098583.1-201ENST00000480875 255 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 RPL5P14-201ENST00000494197 878 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 ARGFXP2-201ENST00000579304 949 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AC067852.5-201ENST00000589299 310 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AL157899.1-201ENST00000604110 936 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AC091193.1-201ENST00000604640 448 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 GAPDHP41-201ENST00000613707 975 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AC007603.3-201ENST00000636915 979 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AC097063.1-201ENST00000426714 1797 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC005702.3-201ENST00000585345 1447 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 RPL5P20-201ENST00000403848 896 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 CASKP1-201ENST00000412870 582 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 SEPT7P8-201ENST00000413308 775 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 RPL23AP85-201ENST00000421838 433 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 YY1P1-201ENST00000427625 668 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 UBE2V2P3-201ENST00000433562 437 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 ARAFP2-201ENST00000440565 559 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 RPL12P49-201ENST00000441100 121 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 RBMY2HP-201ENST00000457961 720 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC236972.4-201ENST00000458091 963 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 NPM1P52-201ENST00000518264 846 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC037479.1-201ENST00000558361 625 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC023968.1-201ENST00000560719 475 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 AL078623.1-201ENST00000602702 907 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC019257.2-201ENST00000605539 497 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC068726.1-201ENST00000610993 341 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 MIR6813-201ENST00000621638 56 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC007342.9-201ENST00000623877 1385 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6□□□□□ -1.45
NUP54Q7Z3B4 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 AC011455.2-201ENST00000599320 3336 ntBASIC6□□□□□ -1.45
NUP54Q7Z3B4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP54Q7Z3B4 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 AL117378.2-201ENST00000622916 1337 ntBASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP54Q7Z3B4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms