Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.42□□□□□ -1.22
PDS5AQ29RF7 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 GNL2P1-201ENST00000451274 2190 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 AC027279.1-201ENST00000568885 4284 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 AC023490.2-201ENST00000359859 470 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 RNU1-150P-201ENST00000362491 162 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 RNU105B-201ENST00000364478 208 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 CDY8P-201ENST00000428380 1279 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 CDY20P-201ENST00000447528 1279 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 RN7SL193P-201ENST00000491708 276 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 OR5H7P-201ENST00000514084 930 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 Y_RNA.667-201ENST00000516212 107 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 MRPS21P9-201ENST00000571150 257 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 MIR4301-201ENST00000577203 66 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 AC005244.1-201ENST00000582566 339 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 PRELID3BP3-201ENST00000584963 545 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 AL683813.2-201ENST00000605245 502 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 AL021368.3-201ENST00000607119 578 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 AP001541.1-201ENST00000623322 1904 ntBASIC7.41□□□□□ -1.22
PDS5AQ29RF7 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PDS5AQ29RF7 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 RNU6-673P-201ENST00000365084 104 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 LYPLA1P3-201ENST00000402650 695 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 AL096800.1-201ENST00000405326 893 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 AL096829.1-201ENST00000413677 457 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 RPL35AP3-201ENST00000414680 288 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 BX284632.2-201ENST00000421091 399 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 AL512605.1-202ENST00000441919 381 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 AL359955.2-201ENST00000445380 353 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 ZNF619P1-201ENST00000446539 752 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 AL445466.1-201ENST00000448432 357 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 HLA-DPA3-207ENST00000454398 229 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 SETP4-201ENST00000455717 868 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 RNA5SP271-201ENST00000516700 88 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 AP000648.1-201ENST00000529682 397 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 AC091193.1-201ENST00000604640 448 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 AL031601.1-201ENST00000605702 394 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 AC003992.1-201ENST00000635364 557 ntBASIC7.4□□□□□ -1.22
PDS5AQ29RF7 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PDS5AQ29RF7 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.4□□□□□ -1.23
PDS5AQ29RF7 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
PDS5AQ29RF7 AL359195.2-201ENST00000623657 4412 ntBASIC7.4□□□□□ -1.23
PDS5AQ29RF7 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
PDS5AQ29RF7 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
PDS5AQ29RF7 AC119674.1-213ENST00000641177 1386 ntBASIC7.4□□□□□ -1.23
PDS5AQ29RF7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
PDS5AQ29RF7 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.4□□□□□ -1.23
PDS5AQ29RF7 AC009135.2-201ENST00000624136 1768 ntBASIC7.4□□□□□ -1.23
PDS5AQ29RF7 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms