Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC089999.3-201ENST00000622440 577 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 CASC19-246ENST00000641625 1606 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS1Q01581 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS1Q01581 ZNF658B-201ENST00000602828 3408 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS1Q01581 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS1Q01581 ZNF101P1-201ENST00000435701 1720 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGCS1Q01581 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGCS1Q01581 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGCS1Q01581 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGCS1Q01581 RPL11P4-201ENST00000332269 436 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 RNA5SP346-201ENST00000363541 121 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 RNU1-59P-201ENST00000364829 162 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 RNA5SP77-201ENST00000365394 120 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 MTND2P12-201ENST00000417560 1252 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 AL360013.1-201ENST00000419031 858 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 AC013403.1-201ENST00000436954 263 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 PPIAP10-201ENST00000438675 458 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 AC234771.2-201ENST00000445718 597 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 RN7SL836P-201ENST00000476140 296 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 AC114728.1-201ENST00000488289 483 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 AC093816.1-201ENST00000515076 913 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 OR6M2P-201ENST00000529831 871 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 OR4A6P-201ENST00000534364 970 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 WBP1LP11-201ENST00000586141 328 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 MIR132-201ENST00000591554 101 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 AC063977.7-201ENST00000594454 337 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 AC004890.3-201ENST00000605566 1095 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 U1.25-201ENST00000614085 162 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 U1.34-201ENST00000618578 162 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 AC048341.3-201ENST00000619323 491 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 U1.31-201ENST00000620022 160 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 MIR6823-201ENST00000622118 61 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 AL359091.1-201ENST00000449048 1734 ntBASIC5.93□□□□□ -1.46
HMGCS1Q01581 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGCS1Q01581 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGCS1Q01581 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGCS1Q01581 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGCS1Q01581 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS1Q01581 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS1Q01581 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.92□□□□□ -1.46
HMGCS1Q01581 AKAP17BP-201ENST00000431706 2719 ntBASIC5.92□□□□□ -1.46
HMGCS1Q01581 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS1Q01581 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS1Q01581 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS1Q01581 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS1Q01581 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS1Q01581 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 RPL6P21-201ENST00000418672 846 ntBASIC5.92□□□□□ -1.46
HMGCS1Q01581 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 RPL9P15-201ENST00000491096 532 ntBASIC5.92□□□□□ -1.46
HMGCS1Q01581 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 CYCSP25-201ENST00000525280 316 ntBASIC5.92□□□□□ -1.46
HMGCS1Q01581 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS1Q01581 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms