Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.14□□□□□ -1.59
LMO4P61968 LCOR-201ENST00000286067 4542 ntBASIC5.14□□□□□ -1.59
LMO4P61968 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.14□□□□□ -1.59
LMO4P61968 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC5.14□□□□□ -1.59
LMO4P61968 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LMO4P61968 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC5.14□□□□□ -1.59
LMO4P61968 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC5.14□□□□□ -1.59
LMO4P61968 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LMO4P61968 RBMY1HP-201ENST00000382759 1389 ntBASIC5.14□□□□□ -1.59
LMO4P61968 AL049634.1-201ENST00000453770 1720 ntBASIC5.14□□□□□ -1.59
LMO4P61968 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.14□□□□□ -1.59
LMO4P61968 AC009135.2-201ENST00000624136 1768 ntBASIC5.14□□□□□ -1.59
LMO4P61968 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.14□□□□□ -1.59
LMO4P61968 AC110716.2-201ENST00000563865 3945 ntBASIC5.14□□□□□ -1.59
LMO4P61968 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.13□□□□□ -1.59
LMO4P61968 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LMO4P61968 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
LMO4P61968 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 AL133243.4-201ENST00000623116 3109 ntBASIC5.13□□□□□ -1.59
LMO4P61968 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC5.13□□□□□ -1.59
LMO4P61968 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
LMO4P61968 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.13□□□□□ -1.59
LMO4P61968 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LMO4P61968 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 AC023490.2-201ENST00000359859 470 ntBASIC5.13□□□□□ -1.59
LMO4P61968 RNA5SP477-201ENST00000362639 119 ntBASIC5.13□□□□□ -1.59
LMO4P61968 RNA5SP435-201ENST00000364044 108 ntBASIC5.13□□□□□ -1.59
LMO4P61968 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LMO4P61968 AL445238.1-204ENST00000400311 463 ntBASIC5.13□□□□□ -1.59
LMO4P61968 AL132875.1-201ENST00000403623 949 ntBASIC5.13□□□□□ -1.59
LMO4P61968 AC245096.1-201ENST00000413104 546 ntBASIC5.13□□□□□ -1.59
LMO4P61968 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.13□□□□□ -1.59
LMO4P61968 RPL35AP31-201ENST00000418340 337 ntBASIC5.13□□□□□ -1.59
LMO4P61968 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.13□□□□□ -1.59
LMO4P61968 CDY8P-201ENST00000428380 1279 ntBASIC5.13□□□□□ -1.59
LMO4P61968 GAPDHP23-201ENST00000444823 993 ntBASIC5.13□□□□□ -1.59
LMO4P61968 CDY20P-201ENST00000447528 1279 ntBASIC5.13□□□□□ -1.59
LMO4P61968 AC017099.1-201ENST00000448261 1028 ntBASIC5.13□□□□□ -1.59
LMO4P61968 AC092967.1-201ENST00000449016 481 ntBASIC5.13□□□□□ -1.59
LMO4P61968 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.13□□□□□ -1.59
LMO4P61968 RWDD4P1-201ENST00000488019 565 ntBASIC5.13□□□□□ -1.59
LMO4P61968 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.13□□□□□ -1.59
LMO4P61968 RNU6-362P-201ENST00000516736 90 ntBASIC5.13□□□□□ -1.59
LMO4P61968 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.13□□□□□ -1.59
LMO4P61968 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.13□□□□□ -1.59
LMO4P61968 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LMO4P61968 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.13□□□□□ -1.59
LMO4P61968 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.13□□□□□ -1.59
LMO4P61968 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.13□□□□□ -1.59
LMO4P61968 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.13□□□□□ -1.59
LMO4P61968 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.13□□□□□ -1.59
LMO4P61968 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.13□□□□□ -1.59
LMO4P61968 AC233702.7-202ENST00000582941 211 ntBASIC5.13□□□□□ -1.59
LMO4P61968 AL391001.1-201ENST00000602747 715 ntBASIC5.13□□□□□ -1.59
LMO4P61968 AL049840.6-201ENST00000604583 345 ntBASIC5.13□□□□□ -1.59
LMO4P61968 AC026124.2-201ENST00000621847 656 ntBASIC5.13□□□□□ -1.59
LMO4P61968 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.13□□□□□ -1.59
LMO4P61968 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.13□□□□□ -1.59
LMO4P61968 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.13□□□□□ -1.59
LMO4P61968 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 AC022325.1-201ENST00000502748 2199 ntBASIC5.13□□□□□ -1.59
LMO4P61968 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
LMO4P61968 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC5.13□□□□□ -1.59
LMO4P61968 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.13□□□□□ -1.59
LMO4P61968 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.13□□□□□ -1.59
LMO4P61968 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.13□□□□□ -1.59
LMO4P61968 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 AL021877.2-201ENST00000624442 10684 ntBASIC5.13□□□□□ -1.59
LMO4P61968 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LMO4P61968 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMO4P61968 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.13□□□□□ -1.59
LMO4P61968 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.12□□□□□ -1.59
LMO4P61968 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 TNPO1P2-201ENST00000426249 2665 ntBASIC5.12□□□□□ -1.59
LMO4P61968 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.12□□□□□ -1.59
LMO4P61968 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
LMO4P61968 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
LMO4P61968 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 PARP4P1-201ENST00000435945 2337 ntBASIC5.12□□□□□ -1.59
LMO4P61968 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms