Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ANXA2P2-201ENST00000435128 1020 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC4.42□□□□□ -1.7
CKS1BP61024 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CKS1BP61024 RPL29P7-201ENST00000440227 457 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 SNX18P9-201ENST00000440580 835 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 AC092106.1-201ENST00000444291 373 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 AC133965.1-201ENST00000452984 354 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC4.42□□□□□ -1.7
CKS1BP61024 AC112187.1-201ENST00000455837 479 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 GAPDHP53-201ENST00000458397 924 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 SNORA35.1-201ENST00000458908 128 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 AC008620.1-201ENST00000468453 592 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC4.42□□□□□ -1.7
CKS1BP61024 RPL7AP23-201ENST00000482625 776 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 AL135933.1-201ENST00000498657 802 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 RNU6-964P-201ENST00000516524 69 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 IGHVIII-25-1-201ENST00000522143 241 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC4.42□□□□□ -1.7
CKS1BP61024 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CKS1BP61024 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.42□□□□□ -1.7
CKS1BP61024 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
CKS1BP61024 AP002383.5-201ENST00000542623 1161 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC4.42□□□□□ -1.7
CKS1BP61024 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.42□□□□□ -1.7
CKS1BP61024 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC4.42□□□□□ -1.7
CKS1BP61024 LSM3P2-201ENST00000551246 273 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 CIPC-206ENST00000555611 599 ntTSL 4 BASIC4.42□□□□□ -1.7
CKS1BP61024 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CKS1BP61024 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CKS1BP61024 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC4.42□□□□□ -1.7
CKS1BP61024 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.42□□□□□ -1.7
CKS1BP61024 EIF4A3P1-201ENST00000578499 647 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC4.42□□□□□ -1.7
CKS1BP61024 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.42□□□□□ -1.7
CKS1BP61024 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.42□□□□□ -1.7
CKS1BP61024 AL035410.2-201ENST00000604963 864 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC4.42□□□□□ -1.7
CKS1BP61024 FRG2MP-201ENST00000613317 856 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 AP001005.3-201ENST00000622049 129 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.42□□□□□ -1.7
CKS1BP61024 FKBP1AP4-201ENST00000631775 336 ntBASIC4.42□□□□□ -1.7
CKS1BP61024 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CKS1BP61024 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
CKS1BP61024 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.42□□□□□ -1.7
CKS1BP61024 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 CASC19-221ENST00000641309 1382 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 AC000123.3-201ENST00000624029 4975 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC4.41□□□□□ -1.7
CKS1BP61024 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CKS1BP61024 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CKS1BP61024 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC4.41□□□□□ -1.7
CKS1BP61024 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 VDAC2P3-201ENST00000430995 828 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 NIP7P1-201ENST00000433227 512 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC4.41□□□□□ -1.7
CKS1BP61024 NPM1P33-201ENST00000438918 872 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 AL450263.2-201ENST00000439400 589 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 AL591363.1-201ENST00000450091 483 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC4.41□□□□□ -1.7
CKS1BP61024 RN7SL518P-201ENST00000491887 280 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC4.41□□□□□ -1.7
CKS1BP61024 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC4.41□□□□□ -1.7
CKS1BP61024 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC4.41□□□□□ -1.7
CKS1BP61024 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 REG4-204ENST00000530654 612 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 AP004609.2-201ENST00000532177 190 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC4.41□□□□□ -1.7
CKS1BP61024 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CKS1BP61024 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC4.41□□□□□ -1.7
CKS1BP61024 AL390726.5-202ENST00000564800 256 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 AC233702.9-201ENST00000581528 203 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 RN7SL25P-201ENST00000583862 260 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC4.41□□□□□ -1.7
CKS1BP61024 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
CKS1BP61024 BUB1P1-201ENST00000603541 607 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 AL356986.1-201ENST00000604085 341 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC4.41□□□□□ -1.7
CKS1BP61024 AC017037.4-201ENST00000624526 826 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms