Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC090568.1-201ENST00000509499 856 ntBASIC7.55□□□□□ -1.2
RHBDL3P58872 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.55□□□□□ -1.2
RHBDL3P58872 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC7.55□□□□□ -1.2
RHBDL3P58872 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.55□□□□□ -1.2
RHBDL3P58872 IGKV1D-22-201ENST00000518953 324 ntBASIC7.55□□□□□ -1.2
RHBDL3P58872 OR7E10P-201ENST00000526420 991 ntBASIC7.55□□□□□ -1.2
RHBDL3P58872 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.55□□□□□ -1.2
RHBDL3P58872 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.55□□□□□ -1.2
RHBDL3P58872 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.55□□□□□ -1.2
RHBDL3P58872 LINC00556-201ENST00000569603 412 ntBASIC7.55□□□□□ -1.2
RHBDL3P58872 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.55□□□□□ -1.2
RHBDL3P58872 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.55□□□□□ -1.2
RHBDL3P58872 AL136097.3-201ENST00000611097 505 ntBASIC7.55□□□□□ -1.2
RHBDL3P58872 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC7.55□□□□□ -1.2
RHBDL3P58872 AC024884.1-201ENST00000620583 399 ntBASIC7.55□□□□□ -1.2
RHBDL3P58872 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.55□□□□□ -1.2
RHBDL3P58872 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RHBDL3P58872 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
RHBDL3P58872 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
RHBDL3P58872 HSPD1P9-201ENST00000420325 1636 ntBASIC7.55□□□□□ -1.2
RHBDL3P58872 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.55□□□□□ -1.2
RHBDL3P58872 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 AC093225.1-201ENST00000506867 1408 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.54□□□□□ -1.2
RHBDL3P58872 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.54□□□□□ -1.2
RHBDL3P58872 MIR365B-201ENST00000362317 111 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
RHBDL3P58872 RNU6-564P-201ENST00000410983 104 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 AL034379.1-201ENST00000423216 253 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.54□□□□□ -1.2
RHBDL3P58872 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.54□□□□□ -1.2
RHBDL3P58872 AL138787.1-202ENST00000437804 898 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.54□□□□□ -1.2
RHBDL3P58872 AL451063.1-201ENST00000450164 1133 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 AC068228.1-201ENST00000461723 211 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.54□□□□□ -1.2
RHBDL3P58872 NPM1P27-201ENST00000502784 830 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 AL158068.1-201ENST00000506116 616 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 AC084337.1-201ENST00000524809 686 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 TRIM77BP-201ENST00000524985 1119 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.54□□□□□ -1.2
RHBDL3P58872 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.54□□□□□ -1.2
RHBDL3P58872 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.54□□□□□ -1.2
RHBDL3P58872 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.54□□□□□ -1.2
RHBDL3P58872 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC7.54□□□□□ -1.2
RHBDL3P58872 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.54□□□□□ -1.2
RHBDL3P58872 AC008507.3-201ENST00000585753 472 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.54□□□□□ -1.2
RHBDL3P58872 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.54□□□□□ -1.2
RHBDL3P58872 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.54□□□□□ -1.2
RHBDL3P58872 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.54□□□□□ -1.2
RHBDL3P58872 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
RHBDL3P58872 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RHBDL3P58872 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RHBDL3P58872 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.54□□□□□ -1.2
RHBDL3P58872 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.54□□□□□ -1.2
RHBDL3P58872 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.54□□□□□ -1.2
RHBDL3P58872 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.54□□□□□ -1.2
RHBDL3P58872 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RHBDL3P58872 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.54□□□□□ -1.2
RHBDL3P58872 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RHBDL3P58872 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.54□□□□□ -1.2
RHBDL3P58872 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RHBDL3P58872 EIF3EP1-201ENST00000433978 1316 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
RHBDL3P58872 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.53□□□□□ -1.2
RHBDL3P58872 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RHBDL3P58872 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
RHBDL3P58872 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.53□□□□□ -1.2
RHBDL3P58872 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RHBDL3P58872 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RHBDL3P58872 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RHBDL3P58872 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RHBDL3P58872 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RHBDL3P58872 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RHBDL3P58872 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RHBDL3P58872 RNA5SP122-201ENST00000384457 108 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 U3.43-201ENST00000410734 213 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.53□□□□□ -1.2
RHBDL3P58872 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RHBDL3P58872 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.53□□□□□ -1.2
RHBDL3P58872 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.53□□□□□ -1.2
RHBDL3P58872 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.53□□□□□ -1.2
RHBDL3P58872 PPIAP27-201ENST00000453800 265 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms