Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.13□□□□□ -1.43
SUMO3P55854 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.13□□□□□ -1.43
SUMO3P55854 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SUMO3P55854 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
SUMO3P55854 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.13□□□□□ -1.43
SUMO3P55854 SPATA2P1-201ENST00000431223 2055 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SUMO3P55854 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SUMO3P55854 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SUMO3P55854 RN7SKP257-201ENST00000364525 309 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 YWHAZP4-201ENST00000392459 708 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 AL034403.1-201ENST00000399414 885 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AL121977.1-201ENST00000401636 979 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AL355615.1-201ENST00000406187 641 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
SUMO3P55854 RNU2-17P-201ENST00000410290 190 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 RN7SKP296-201ENST00000411185 341 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 RPS21P8-201ENST00000413365 247 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.13□□□□□ -1.43
SUMO3P55854 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.13□□□□□ -1.43
SUMO3P55854 RPS7P12-201ENST00000422385 582 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.13□□□□□ -1.43
SUMO3P55854 AC114973.1-201ENST00000429057 632 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.13□□□□□ -1.43
SUMO3P55854 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.13□□□□□ -1.43
SUMO3P55854 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.13□□□□□ -1.43
SUMO3P55854 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.13□□□□□ -1.43
SUMO3P55854 HMGB1P26-201ENST00000452520 628 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AC019084.1-201ENST00000457337 432 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 snoU109.3-201ENST00000459477 145 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 RPS17P11-201ENST00000474297 293 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AL079303.1-201ENST00000486611 463 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.13□□□□□ -1.43
SUMO3P55854 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.13□□□□□ -1.43
SUMO3P55854 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.13□□□□□ -1.43
SUMO3P55854 UGT2A3P7-201ENST00000510485 734 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AC010442.1-201ENST00000515583 816 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 SCARNA11.1-201ENST00000516918 132 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 MTCYBP19-201ENST00000517463 1124 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.13□□□□□ -1.43
SUMO3P55854 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.13□□□□□ -1.43
SUMO3P55854 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.13□□□□□ -1.43
SUMO3P55854 PHBP2-201ENST00000532859 806 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 OR4A41P-201ENST00000533053 928 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.13□□□□□ -1.43
SUMO3P55854 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.13□□□□□ -1.43
SUMO3P55854 AC091304.4-201ENST00000565703 620 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 MIR5095-201ENST00000578844 88 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.13□□□□□ -1.43
SUMO3P55854 SUMO2P14-201ENST00000604488 293 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AC124016.2-201ENST00000610058 665 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.13□□□□□ -1.43
SUMO3P55854 AC004241.2-201ENST00000614562 444 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AL445647.2-201ENST00000615170 130 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 MIR7854-201ENST00000620068 65 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AC126544.2-201ENST00000625174 749 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AC008993.2-201ENST00000631744 806 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.13□□□□□ -1.43
SUMO3P55854 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.13□□□□□ -1.43
SUMO3P55854 AC092821.3-202ENST00000641304 2767 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SUMO3P55854 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.13□□□□□ -1.43
SUMO3P55854 AC106754.1-201ENST00000562632 1513 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.13□□□□□ -1.43
SUMO3P55854 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.13□□□□□ -1.43
SUMO3P55854 AC009220.2-201ENST00000489759 1751 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 AC073342.2-201ENST00000595842 1800 ntBASIC6.13□□□□□ -1.43
SUMO3P55854 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.13□□□□□ -1.43
SUMO3P55854 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SUMO3P55854 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.13□□□□□ -1.43
SUMO3P55854 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SUMO3P55854 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms