Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH11P55287 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH11P55287 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH11P55287 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.82□□□□□ -1.48
CDH11P55287 GAPDHP41-201ENST00000613707 975 ntBASIC5.82□□□□□ -1.48
CDH11P55287 AL445649.1-201ENST00000615941 691 ntBASIC5.82□□□□□ -1.48
CDH11P55287 AL162377.2-201ENST00000624532 337 ntBASIC5.82□□□□□ -1.48
CDH11P55287 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH11P55287 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CDH11P55287 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH11P55287 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH11P55287 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH11P55287 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH11P55287 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH11P55287 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH11P55287 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH11P55287 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH11P55287 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH11P55287 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH11P55287 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH11P55287 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH11P55287 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH11P55287 AP003486.1-201ENST00000525716 3994 ntBASIC5.81□□□□□ -1.48
CDH11P55287 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH11P55287 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH11P55287 BIN2P1-201ENST00000504996 1530 ntBASIC5.81□□□□□ -1.48
CDH11P55287 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH11P55287 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDH11P55287 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDH11P55287 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDH11P55287 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDH11P55287 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH11P55287 RNA5SP321-201ENST00000362722 111 ntBASIC5.81□□□□□ -1.48
CDH11P55287 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH11P55287 AC245036.1-201ENST00000391727 309 ntBASIC5.81□□□□□ -1.48
CDH11P55287 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH11P55287 AL590635.1-201ENST00000406314 586 ntBASIC5.81□□□□□ -1.48
CDH11P55287 UBE2V1P14-201ENST00000415815 558 ntBASIC5.81□□□□□ -1.48
CDH11P55287 AL359092.1-201ENST00000417156 265 ntBASIC5.81□□□□□ -1.48
CDH11P55287 AL929472.1-201ENST00000417484 429 ntBASIC5.81□□□□□ -1.48
CDH11P55287 RPL7AP51-201ENST00000422016 760 ntBASIC5.81□□□□□ -1.48
CDH11P55287 BX119904.3-201ENST00000428194 957 ntBASIC5.81□□□□□ -1.48
CDH11P55287 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH11P55287 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH11P55287 GAPDHP37-201ENST00000442317 968 ntBASIC5.81□□□□□ -1.48
CDH11P55287 AC234771.2-201ENST00000445718 597 ntBASIC5.81□□□□□ -1.48
CDH11P55287 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDH11P55287 AL022237.1-201ENST00000446663 358 ntBASIC5.81□□□□□ -1.48
CDH11P55287 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH11P55287 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH11P55287 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH11P55287 AC022206.1-201ENST00000495947 347 ntBASIC5.81□□□□□ -1.48
CDH11P55287 RN7SKP183-201ENST00000517169 324 ntBASIC5.81□□□□□ -1.48
CDH11P55287 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH11P55287 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH11P55287 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH11P55287 EIF1AXP2-201ENST00000555940 413 ntBASIC5.81□□□□□ -1.48
CDH11P55287 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH11P55287 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH11P55287 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH11P55287 RPL29P33-201ENST00000587474 316 ntBASIC5.81□□□□□ -1.48
CDH11P55287 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH11P55287 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH11P55287 AC073389.3-201ENST00000609434 935 ntBASIC5.81□□□□□ -1.48
CDH11P55287 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.81□□□□□ -1.48
CDH11P55287 AC107905.1-201ENST00000616204 426 ntBASIC5.81□□□□□ -1.48
CDH11P55287 MIR7854-201ENST00000620068 65 ntBASIC5.81□□□□□ -1.48
CDH11P55287 RAB28P4-201ENST00000622233 665 ntBASIC5.81□□□□□ -1.48
CDH11P55287 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDH11P55287 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH11P55287 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDH11P55287 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH11P55287 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH11P55287 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDH11P55287 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH11P55287 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH11P55287 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH11P55287 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CDH11P55287 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 AC107977.1-201ENST00000355745 939 ntBASIC5.8□□□□□ -1.48
CDH11P55287 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
CDH11P55287 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.8□□□□□ -1.48
CDH11P55287 RN7SKP250-201ENST00000363924 321 ntBASIC5.8□□□□□ -1.48
CDH11P55287 RNA5SP478-201ENST00000364657 115 ntBASIC5.8□□□□□ -1.48
CDH11P55287 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDH11P55287 AL133260.1-201ENST00000405720 405 ntBASIC5.8□□□□□ -1.48
CDH11P55287 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH11P55287 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 CYP4F30P-202ENST00000420048 405 ntBASIC5.8□□□□□ -1.48
CDH11P55287 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDH11P55287 AL139184.1-202ENST00000422303 222 ntBASIC5.8□□□□□ -1.48
CDH11P55287 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms